Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2335 ATGAAAACCCTAACGCAAGCCTTGGCCAAGACCGCGGCCGTCATCGAGAAGAAGGTTCAGACCACCGTGCAGGAGGTCACCGGACCCAAGGCTCTCCAGGACTACGAGCTCCTTGATCAGATCGCATCCGCGGGGCCTGGTCTCGCATGGAGGCTTTACTCGGCTAGGCCCAAGGAGCCATCGCGCCAGCAACAGTATCCCCTTGTTTGTGTTTGGGTACTGGACAAGCGGGTGCTATCCGAGGCGCGAATGCGTGCTGGGCTTACCAAGGCAGCTGAAGATTCGTTTTTGGATTTGATTCGGGCCGATGCGGGTAAACTCGTGCGATTGAGGCATCCCGGCGTGGTGCATGTGGTGCAAGCGTTGGATGAGAGCAAGAATGCGATGGCAATGGTGACTGAACCATTGTTTGCATCGGTTGCTAATACTCTTGGGGATTTGGAGAATGTTGCCAATGTTCCTAAGGAACTCAGGGGAATGGACATGGGACTGTTGGAAGTGAAGCATGGCTTACTTCAGGTAGCAGAATCCCTGGACTTCTTGCACAACCATGCCCATCTTATTCATCGAGCAATATCACCTGAGAATATTCTTATCACCTCAAGTGGAGCTTGGAAACTTGGCGGATTTGGTTTTGCAGTTTCAGCAGCTCAGGCCTCTGGTGACTCGACTAATCTGCAAGCTTTCCATTATGCTGAATATGATGTGGAGGACTCTATTCTTCCGCTTCAGCCATCGCTTAATTACACTGCTCCTGAGCTGGTCAAGAGCACTGTGTCTTCAGCTGGGTGGGCTTCTGATATTTTCAGCTTTGGTTGTGTTGCTTACCATTTAATTGCTCGCAAGCCTTTGTTTGACTGCCACAACAATGTGAAGATGTACATGAATACATTGACTTACTTATCCAGTGACACATTCTCATCTATTCCTCCCGAGTTGGTTCCTGACCTGCAGAGGATGCTATCTTCAAATGAGTCTTCAAGACCAACTGCAATGGCTTTTACAGGCTCCCCTTTTTTCCGGAATGACACTAGGTTGCGTGCTCTGCGCTTCCTTGACCATATGCTTGAAAGAGATAACATGCAGAAGACAGACTTCTTAAAAGCTTTATCAGATATGTGGAAAGATTTTGACAGCCGTGTATTGCGGTACAAGGTACTTCCACCTCTCTGTGCTGAACTTAGGAATGTGGTAATGCAGCCAATGATTCTTCCTATGGTTCTTACTATTGCAGAGTCTCAGGATAAAAGTGATTTTGAGATCACAACTCTTCCAGCGCTTGTTCCTGTCTTGAGCTCTGCAGCAGGTGAGACATTGTTGCTGCTTGTCAAGCATGCAGAACTTTTAATTAACAAGACTAGTCAGGAGCATTTAGTTTCACATGTTCTGCCTATGGTTGTTCGGGCTTTCGATGAGAATGATGCTCGTGTACAAGAAGAGGTTCTGAAGAAATCTATATCCCTGGCTAAGCAACTTGATACCCAGCTGGTCAAACAAGTGGTTCTGCCCCGTGTTCATGGTTTAGCGCTTAAAACAACGATTGCTGCGGTTAGAGTCAATGCCTTACTGTGCTTGGGAGAAATGGTTAGCCGACTCGATAAACCTGCTGTTCTAGACATCTTGCAGACTATTCAGCGCTGTACTGCTGTTGACCGTTCTCCTCCTACCCTTATGTGTACACTTGGGGTTGCAAATGCTATTTATAAACGGTATGGAGTAGAGTTTGTTGCCGAGCATGTGCTTCCATTGGTTATACCGCTCCTGACAACTCAACAACTGAATGTTCAGCAGTTTGCCAAATATATGCTCTTTGTCAAGGATATGCTAAGGTTGATAGAGGAGAAGCGAGGAGTGGTTGTGACGGAGTCTGGAATCCCAGAGGTCACGAAACCATTTCCTCCGGTTAATGGTCTTCACAATGAAGTTACTTCTAAAACAAACAGCATTGTTGCTTCTACAACCAAGAGCAACTCTTCTTGGGATGATGATTGGCGTAGCACTTCAAAAGGGACTACCACCTCTTCCCAAAGTTTTACTGACAAATCAAGTCAACCTGTGCCGGGAATCCCAATGGTTCAAATAACATCGTCACAGCAACAATCGTCTTCATCTGCTGTGTCTAATCAGCAGGCTACCATGTCATGCCCCTCAGTGGATTTAGAGTGGCCTCCTCGTGCTTCTGCTACTGGGAACCAATATTTAGGTGATTCTGAAAGTCATATGAAGACAACAGGAACATCTTCTATGTCTAGTCTTGACGACTTTGATCCTTTTGCTGATTGGCCTCCACGTTCTAGTGGCTCATCAGGCGGATCTGGGATTTCCAGCAATGGTACTTTAGGACCTCCACTAAACAAAAATGGGCCTAGTTTAATGTCAAACACTTCAAATGCTATGAATAATCAAACCAACAAAAGTTGGTCTTTTAATCCGCTGAGTGCAGCTGATCCAATAGGTTTGAGCTTTGGTAATTCTAGTTCAACCACCGGTAGTCTTCATGGCAGTACAGCTTCTCAGAATTCTCTTGCCTACTTAAAGCAGAGTCAGGGATTCCCAACATCCAATGTTCCACGCGCAGAGAATAAGTCAACAGATCTTGGATCCATCTTTGCTTCTGATCAGAATGACCTGATTGCACCTAGGCTTGCACCACCACCCTCAACTACAGTAGGCAGAGGCAGAGGAAGAGGGAGGGGAGCTGCTTCAAGCATCAGGTCCACTCATACCAAGTCTGAGGAGCCACCCCTTATGGATTTGTTGGGGTAG 2766 0.4671 MKTLTQALAKTAAVIEKKVQTTVQEVTGPKALQDYELLDQIASAGPGLAWRLYSARPKEPSRQQQYPLVCVWVLDKRVLSEARMRAGLTKAAEDSFLDLIRADAGKLVRLRHPGVVHVVQALDESKNAMAMVTEPLFASVANTLGDLENVANVPKELRGMDMGLLEVKHGLLQVAESLDFLHNHAHLIHRAISPENILITSSGAWKLGGFGFAVSAAQASGDSTNLQAFHYAEYDVEDSILPLQPSLNYTAPELVKSTVSSAGWASDIFSFGCVAYHLIARKPLFDCHNNVKMYMNTLTYLSSDTFSSIPPELVPDLQRMLSSNESSRPTAMAFTGSPFFRNDTRLRALRFLDHMLERDNMQKTDFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVMQPMILPMVLTIAESQDKSDFEITTLPALVPVLSSAAGETLLLLVKHAELLINKTSQEHLVSHVLPMVVRAFDENDARVQEEVLKKSISLAKQLDTQLVKQVVLPRVHGLALKTTIAAVRVNALLCLGEMVSRLDKPAVLDILQTIQRCTAVDRSPPTLMCTLGVANAIYKRYGVEFVAEHVLPLVIPLLTTQQLNVQQFAKYMLFVKDMLRLIEEKRGVVVTESGIPEVTKPFPPVNGLHNEVTSKTNSIVASTTKSNSSWDDDWRSTSKGTTTSSQSFTDKSSQPVPGIPMVQITSSQQQSSSSAVSNQQATMSCPSVDLEWPPRASATGNQYLGDSESHMKTTGTSSMSSLDDFDPFADWPPRSSGSSGGSGISSNGTLGPPLNKNGPSLMSNTSNAMNNQTNKSWSFNPLSAADPIGLSFGNSSSTTGSLHGSTASQNSLAYLKQSQGFPTSNVPRAENKSTDLGSIFASDQNDLIAPRLAPPPSTTVGRGRGRGRGAASSIRSTHTKSEEPPLMDLLG 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2335 921 MobiDBLite consensus disorder prediction 639 716 - -
Acco01g2335 921 SUPERFAMILY ARM repeat 308 603 IPR016024 -
Acco01g2335 921 Pfam Protein kinase domain 106 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2335 921 Gene3D Phosphorylase Kinase; domain 1 31 134 - -
Acco01g2335 921 MobiDBLite consensus disorder prediction 636 810 - -
Acco01g2335 921 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 33 905 - -
Acco01g2335 921 SMART serkin_6 35 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2335 921 MobiDBLite consensus disorder prediction 765 810 - -
Acco01g2335 921 SUPERFAMILY Protein kinase-like (PK-like) 30 344 IPR011009 -
Acco01g2335 921 CDD PK_SCY1_like 41 342 - -
Acco01g2335 921 Gene3D Transferase(Phosphotransferase) domain 1 138 344 - -
Acco01g2335 921 MobiDBLite consensus disorder prediction 874 921 - -
Acco01g2335 921 MobiDBLite consensus disorder prediction 730 753 - -
Acco01g2335 921 ProSiteProfiles Protein kinase domain profile. 35 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2335 921 Gene3D - 345 616 IPR011989 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2335 171 345 MAP Kinase Kinase Kinase AT3G13530 28.889 8.85e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Acco01g2335 Pkinase 3e-24 CL0016