Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2329 ATGATTCAAGAAGCTAAGATATACAAGGCTGATGATGAGAGGTACAAGAAGAAAGCTGAAGCAAAGAATGCCTTGAAGGACCATATATACAAAATCAGGACTGGTATAAATAATGGGAAGATTGGATCAGGGCTTGCTGCTGCAGACAGGAAGAAGATTGAGGATGTGATCAAAAGAGCCTCAAAGCTGGTTGATAACCAGAAGCTTGCTGAAGTTGATGAGTATGAGCACGAGAGGAGAAAGCTTGAGAGATTATCTTTACAGGTTGGAGCTTTTGGTTCTTCTTCACTTCTCGTCGAATTTCGTCACTGGACCAGAGGCGTTTTCGCCCTTCGTCGTCCTTCGTCGCGGGTATACTGTGCAAAATGA 369 0.4363 MIQEAKIYKADDERYKKKAEAKNALKDHIYKIRTGINNGKIGSGLAAADRKKIEDVIKRASKLVDNQKLAEVDEYEHERRKLERLSLQVGAFGSSSLLVEFRHWTRGVFALRRPSSRVYCAK 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2329 122 Coils Coil 65 85 - -
Acco01g2329 122 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 20 85 IPR029048 -
Acco01g2329 122 Gene3D - 1 90 IPR029048 -
Acco01g2329 122 Pfam Hsp70 protein 1 89 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2329 Acco-ChrAcco01 39354335 39354703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2329 1 85 Calmodulin-binding Proteins AT3G12580 51.765 2.78e-21 85.9