Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2315 ATGAGACACATTTTGTTTGAGCTAAGCTTTTTGACCTTCTTGTGTGTTGCTTTTGCTCTGAGCCCTGATGGGGTCACTCTGCTTTCACTCTCAAAGCATTGGATATTTGTGCCTCCTTCCATTAGTTCAAGCTGGAGTCTCTCTGATTCAACTCCATGTTCATGGGTAGGAATCCAATGCGACGATGCCCACAGTGTAATCTCCCTTAACCTCACTTATTCTTTTTTCTCTGGTCAATTAGGCCCTGAAATAGGACAGTTAAACAATTTGCAAACCCTTGTTCTTTATTCTAATAATCTCTCTGGAAGCATTCCCCCAGAGATAGGAAATTGTAGCCTGTTGAAGTATTTGGACCTTTCCCAAAACAACTTCACCGGAAAAATACCAAATAGCTTAGGCAATTGTAGTATGCTTGAGCACTTGGATCTTTCCGAAAACGCCGTTAGTGGGGAAATTCCAGATAGCTTCAGAAGGTTACAAAAATTGCAACATCTGTACCTTCATTCTAATTTTATCCTCAGCGGTGAAATTCCAGAATACTTGTTTGATTTTTCTCAGTTAGACTCCGTGCTTTTGCAAAACAACAGCCTAAGTGGTACTATCCCAATGAATATTGGCAATAGCACCAAACTTAGGTGGTTGTATCTGTACAATAATCGATTGTCTGGGATCATACCCACGTTTATTGGAAACTGCAGTGAATTAGAGCGAGTGCTTCTAGGTGAGAACCAACTACTGGGGATTTTGCCTCAAAGTCTTAACAACCTCCAGAATCTTGAGTATCTTAGTGTCAAATACAATAAGCTTGAGGGTCCAATTCCATTAGGTTCTGGAAGTTGCAGTAGTCTATACTTTTTGGATTTGTCATACAATGTATTCAGTGGGAATGTTCCTTCAGGATTAAGGAATTGTAGTGGGTTGGCCTACTTTTATGCTGTGAATAGCAACTTAGTAGGTAACATTCCAGTTTTCTTGGGCTCACTGAGCAAACTTTCTGCTCTTCACCTTTCTCAAAACCACTTGTCTGGACAAATACCTCCAGAAATTAGTCGTTGCCGGTCTTTGACGGAGTTGCATTTAGACGGCAATCAACTTGATGGAGAAATTCCCAATGAGTTGGGAATGCTAACTGAGCTGCAGATGTTGTATTTGTTTGACAACCAATTGACAGGCAATATCCCAGTTAGCATATGGAAGATTCCAAGTCTTCAGTCTATTCAATTGTACAATAATAGCTTTCATGGGGAGTTACCTTTGGAAGTCACTGAGTTAAAGCAGCTGCAAAATATCTCATTGGCTGAGAACAACTTCTCCGGGGTTCTACCTCAAAGTTTAGGAATTAATAGTAGTTTGGTGTGGTTGGACTTGAGAAATAACAAGTTTACCAGTCATCTCCCTCTGAATCTTTGCTTTGGAATGAAATTAGAAAGGTTAATTGTGGGTGATAATCAGCTGCAAGGTAGAATACCGTCCAGCTTAGGAGGCTGTACAAGTCTTAAAAGGTTGATTCTCAAATCAAATAATTTTACAGGACCTCTTCCTGCTTTTGAAAATAATATGAGTCTTGAATACATGGACATGAGCAGTAATAGCATCAGTGAAACAATTCCATCTAGTTTAGGAAATTGCAAAAACCTCACTTATATTAATTTGTCCATAAACAAACTTGTAGGACTCATACCGCCAGAGTTAGGAAACCTTGTAAAACTTCACGAGTTGCATCTTTCTTATAACAATTTGGAAGGTCCTTTGCCATCTAACCTGTCAAACTGTATCAAAATGGAAAAATTTGATGTGGGGTTCAATTACTTGAATGGTTCATTTCCATCAAGTTTGAGTGCTTGGACAGGTCTATCAACTTTGAACTTAAGAGAGAATCATTTCACTGGTGGTATCCCAATATTCTTATCAGGATTTCAACAGCTTTTTGACCTACAGCTTGGGGGAAATTCTTTTGGAGGTGAAATTCCTAGCTCAATTGGATCACTGCAGAATCTACGATATGGATTGAATCTAAGTGCTAATGGACTAAAAGGTGAGATTCCATTGGAGATTAGGAAGCTGAAAAATCTCCAAATATTGGATTTATCGCTTAACAATTTGTCCAAAAGCATTGAAGTTCTAGAACAACTCTCTTCACTAGATGAAGTTAATATCTCATTCAATTCCTTTGTCGGTCCTGTGCAGAATAGACTGATGAAGTTTAATATTTCATCATTCTTGGGTAATCCTGGGTTATGCATTAATTGTTTTTCCTTTGATAGCCTAAATTGCCCAGAGAATGTCGGTTTGGGACCTTGTGGCCACAAATCAAGTCATCACAAAGGATTGAGTAGGTTGGAAATCATAGCAATATCAGCTGGATCTTCCATTTTCATTATTCTCTTGTTGCTAGGACTAGCTTTCATGCTTCTCCTTGACAAAAGATCTCAGCAAGATATCAGAATCTTTCCAAGTCATGGTTCATCTTCACTTCTCAAGAAAATCATGAATGCTACGGAAAACCTAAACGATCGGTATATAATTGGCAAAGGAGCTCATGGAGTTGTCTATAAAGTTTCACTAGATCCTCAAAAGGTTTTTGCTTTGAAGAAATTTCCATTTGCTCACGACAAGGGACAACGCAATAGCATGAGCAGAGAACTTGAAACCATCGGGAAGATTAAGCATCGAAATCTGGTAAGATTGGAGAACTTCTGGTTGCGAAAGAACTATGGCTTGATCATGTACACCTTCATGCAAAAGGGGAGCCTTCATGATGTTCTGCATGAAATAAATCCACCCCCATTGTTGTCGTGGAGTGTTCGCTATAAGATAGCCTTTGGAATTGCTCAAGGACTAGCATATCTCCATTTCGACTGCGATCCGGTCATAGTACATCGCGACATCAAATCAAGCAACATCCTTTTAGATTCTGATATGGAGCCCCATATTGCTGATTTTGGTATTGCTAAGGTTTTGAAAGAATCCTCTACTTCAACGACGTCTATTGTTGTTCCTGGTACAACGGGGTATATTGCACCAGAGAATGCATTTTCAGTCGTAGTGAGCACAAAATCTGATGTGTATAGTTATGGAGTAGTTTTGCTTGAGCTGATAACCAGGAAGAAGGTGTTGGATGCTTCATTTACGGAGGAGGGAACAGATATAGTGGGGTGGGTCAGATCTGTATGGGAAGAATCAAGAGAAATTAAAGGGATTGTAGATCCAATCCTTTGTGATGAATTTAGAGTTTCTAATGTTGGGGAAGAAGTTGAACAAGTGGTCTTAGTGGCTCTGAGATGTACTGAGAATGATCCAAGAATGAGACCAACAATGAGAGAAGTCGTCAGCAATTTGATTATTAGAAGCAAAGCTTGTGGCAATTCAATTGTAAAAGCTTGA 3384 0.3927 MRHILFELSFLTFLCVAFALSPDGVTLLSLSKHWIFVPPSISSSWSLSDSTPCSWVGIQCDDAHSVISLNLTYSFFSGQLGPEIGQLNNLQTLVLYSNNLSGSIPPEIGNCSLLKYLDLSQNNFTGKIPNSLGNCSMLEHLDLSENAVSGEIPDSFRRLQKLQHLYLHSNFILSGEIPEYLFDFSQLDSVLLQNNSLSGTIPMNIGNSTKLRWLYLYNNRLSGIIPTFIGNCSELERVLLGENQLLGILPQSLNNLQNLEYLSVKYNKLEGPIPLGSGSCSSLYFLDLSYNVFSGNVPSGLRNCSGLAYFYAVNSNLVGNIPVFLGSLSKLSALHLSQNHLSGQIPPEISRCRSLTELHLDGNQLDGEIPNELGMLTELQMLYLFDNQLTGNIPVSIWKIPSLQSIQLYNNSFHGELPLEVTELKQLQNISLAENNFSGVLPQSLGINSSLVWLDLRNNKFTSHLPLNLCFGMKLERLIVGDNQLQGRIPSSLGGCTSLKRLILKSNNFTGPLPAFENNMSLEYMDMSSNSISETIPSSLGNCKNLTYINLSINKLVGLIPPELGNLVKLHELHLSYNNLEGPLPSNLSNCIKMEKFDVGFNYLNGSFPSSLSAWTGLSTLNLRENHFTGGIPIFLSGFQQLFDLQLGGNSFGGEIPSSIGSLQNLRYGLNLSANGLKGEIPLEIRKLKNLQILDLSLNNLSKSIEVLEQLSSLDEVNISFNSFVGPVQNRLMKFNISSFLGNPGLCINCFSFDSLNCPENVGLGPCGHKSSHHKGLSRLEIIAISAGSSIFIILLLLGLAFMLLLDKRSQQDIRIFPSHGSSSLLKKIMNATENLNDRYIIGKGAHGVVYKVSLDPQKVFALKKFPFAHDKGQRNSMSRELETIGKIKHRNLVRLENFWLRKNYGLIMYTFMQKGSLHDVLHEINPPPLLSWSVRYKIAFGIAQGLAYLHFDCDPVIVHRDIKSSNILLDSDMEPHIADFGIAKVLKESSTSTTSIVVPGTTGYIAPENAFSVVVSTKSDVYSYGVVLLELITRKKVLDASFTEEGTDIVGWVRSVWEESREIKGIVDPILCDEFRVSNVGEEVEQVVLVALRCTENDPRMRPTMREVVSNLIIRSKACGNSIVKA 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2315 1127 Gene3D Ribonuclease Inhibitor 319 417 IPR032675 -
Acco01g2315 1127 SMART LRR_typ_2 567 591 IPR003591 -
Acco01g2315 1127 SMART LRR_typ_2 688 711 IPR003591 -
Acco01g2315 1127 SMART LRR_typ_2 256 280 IPR003591 -
Acco01g2315 1127 SMART LRR_typ_2 159 184 IPR003591 -
Acco01g2315 1127 SMART LRR_typ_2 209 231 IPR003591 -
Acco01g2315 1127 SMART LRR_typ_2 328 352 IPR003591 -
Acco01g2315 1127 SMART LRR_typ_2 424 447 IPR003591 -
Acco01g2315 1127 SMART LRR_typ_2 87 111 IPR003591 -
Acco01g2315 1127 SMART LRR_typ_2 449 472 IPR003591 -
Acco01g2315 1127 SMART LRR_typ_2 376 400 IPR003591 -
Acco01g2315 1127 Pfam Leucine Rich repeat 352 368 IPR001611 GO:0005515
Acco01g2315 1127 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 468 761 - -
Acco01g2315 1127 Gene3D Ribonuclease Inhibitor 172 318 IPR032675 -
Acco01g2315 1127 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 202 297 - -
Acco01g2315 1127 Gene3D Ribonuclease Inhibitor 21 171 IPR032675 -
Acco01g2315 1127 Pfam Leucine rich repeat N-terminal domain 22 61 IPR013210 -
Acco01g2315 1127 Gene3D Ribonuclease Inhibitor 418 519 IPR032675 -
Acco01g2315 1127 Gene3D Phosphorylase Kinase; domain 1 801 912 - -
Acco01g2315 1127 ProSitePatterns Protein kinases ATP-binding region signature. 842 864 IPR017441 GO:0005524
Acco01g2315 1127 ProSitePatterns Serine/Threonine protein kinases active-site signature. 958 970 IPR008271 GO:0004672|GO:0006468
Acco01g2315 1127 Pfam Leucine rich repeat 210 269 IPR001611 GO:0005515
Acco01g2315 1127 Pfam Leucine rich repeat 521 580 IPR001611 GO:0005515
Acco01g2315 1127 Pfam Leucine rich repeat 114 170 IPR001611 GO:0005515
Acco01g2315 1127 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 324 417 - -
Acco01g2315 1127 SUPERFAMILY Protein kinase-like (PK-like) 814 1115 IPR011009 -
Acco01g2315 1127 Coils Coil 691 711 - -
Acco01g2315 1127 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 803 912 - -
Acco01g2315 1127 FunFam Serine/threonine-protein kinase-like protein CCR4 913 1126 - -
Acco01g2315 1127 SUPERFAMILY L domain-like 22 311 - -
Acco01g2315 1127 Gene3D Ribonuclease Inhibitor 520 762 IPR032675 -
Acco01g2315 1127 SMART serkin_6 836 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2315 1127 SUPERFAMILY RNI-like 369 720 - -
Acco01g2315 1127 ProSiteProfiles Leucine-rich repeat profile. 690 712 IPR001611 GO:0005515
Acco01g2315 1127 Gene3D Transferase(Phosphotransferase) domain 1 913 1122 - -
Acco01g2315 1127 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 483 1113 - -
Acco01g2315 1127 Pfam Protein kinase domain 841 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2315 1127 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 20 182 - -
Acco01g2315 1127 ProSiteProfiles Protein kinase domain profile. 836 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2315 Acco-ChrAcco01 39207783 39211251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2315 12 1110 Receptor kinase-like Gene Family AT1G73080 49.641 0.0 972
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco01g2315 Pkinase 6.3e-43 CL0016