Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2310 ATGTTGCCCTGTATCCTATGGTTTAGTATAGAAAAATTAGATTTGGACCTTCCAAGGCCAATTACTGTGTTATATCGTGGTAATGCTTCCTCCATCTGTTATATACTCGGGATTTCGAGTAAAGGCATCAAAGAAGGTGCTTTGAAGAAATCAGTAGGCATTGCCTCTGCTCAATCGTCGCCCCCGTCGTCCAGCACTCCTCCAACTGCCACTACCGACTCCACCGTATCCATCCCAGGCACCATGGCTGAGGAGGAGCCCAAGCCCTTGACCTATATTCCTGAGGTTATCTTGAAGAAACGAAAAAGCAGCGAAGCATTGGCCTTGAGGAAAAAGGATCAACTTCAGCAGAAGAAGTTCCAAACAAAGAATTCCAAGGATTATATCAAAAAGCCTGAGGATTTCATCATAGAGTATCGAAACAAGGAGCTTGACCTTATTAGAATGAATCGACGGGTCAAGAGGATCAAGAAACAACCAGAGCTATTGAGGCCAAATTCAAATTCGAAGTTGTTATTAATCATTCGGATACAAGGGACAAATGACATGCATCAAAAAACCCGAAAGGCCTTGAACCAATTGAATTTGAGAAGAATATTCAGTGCTGTCTTTGTGAAGGCAAGTGTGGGAATCATGGCAAAGCTGCAGAGGGTGGAACCATATGTCACCTATGGGTATCCTAATCTTAAAACCATAAAGGAACTGATCTACAAGAAGGGATTCGCAAAAATAGACAACGAGAAAGTTCCTCTGACAGACAATAACATCATTGAACAGGCATTGGGAAAGTATGGAATGGTGTGCATAGAAGATATGGTCCATGAAATTGTTAATGTTGGTCCACACTTCGAAGAAGTTGCCAGGTTCTTGTGGCCCTTTGAACTTAACAAACCTGCTGATGGCTTGCAAGGATCAAAAGCCTTACACAAGAATGGTGGAGACACGGGGAACCGGGAAGATCTCATCAACGAACTAATCAACAAAATGAATTAA 993 0.425 MLPCILWFSIEKLDLDLPRPITVLYRGNASSICYILGISSKGIKEGALKKSVGIASAQSSPPSSSTPPTATTDSTVSIPGTMAEEEPKPLTYIPEVILKKRKSSEALALRKKDQLQQKKFQTKNSKDYIKKPEDFIIEYRNKELDLIRMNRRVKRIKKQPELLRPNSNSKLLLIIRIQGTNDMHQKTRKALNQLNLRRIFSAVFVKASVGIMAKLQRVEPYVTYGYPNLKTIKELIYKKGFAKIDNEKVPLTDNNIIEQALGKYGMVCIEDMVHEIVNVGPHFEEVARFLWPFELNKPADGLQGSKALHKNGGDTGNREDLINELINKMN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2310 330 Coils Coil 139 159 - -
Acco01g2310 330 PANTHER 60S RIBOSOMAL PROTEIN L7 90 330 IPR039699 -
Acco01g2310 330 CDD Ribosomal_L7_archeal_euk 171 330 IPR035808 -
Acco01g2310 330 SUPERFAMILY Ribosomal protein L30p/L7e 171 330 IPR036919 -
Acco01g2310 330 NCBIfam 60S ribosomal protein uL30 94 330 IPR005998 GO:0000463|GO:0003735|GO:0022625
Acco01g2310 330 Pfam Ribosomal protein L30p/L7e 172 222 IPR016082 -
Acco01g2310 330 Gene3D - 171 274 IPR036919 -
Acco01g2310 330 Gene3D - 275 330 IPR036919 -
Acco01g2310 330 MobiDBLite consensus disorder prediction 55 79 - -
Acco01g2310 330 Pfam Ribosomal L30 N-terminal domain 93 155 IPR012988 -
Acco01g2310 330 MobiDBLite consensus disorder prediction 55 84 - -
Acco01g2310 330 FunFam 60S ribosomal protein L7 171 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2310 Acco-ChrAcco01 39152167 39161938 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2310 82 330 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 56.175 2.33e-88 263