Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2296 ATGACCGAGTTAGCATCAACCTCTTCTTCTTTCCATTACCAATGGACTTACGATGTCTTTATCAATTTTCGCGGCGAAGATACTCGTCATGGTTTTATAGGAAATCTGTATAATGCTTTAAAAAAAACGGGAGTTCGCACCTTCCTTGATGATGCGGAACTAAGAAGAGGGGATGAAATTACACCAACACTACTCAAATCAATTGAGGATTCCAGAATGGCCATTACAGTATTTTCAAAGAACTACGCTTCTTCCACATTTTGTCTCAACGAACTTGTTGAAATTCATGAGTGCATCAAGAGAAAGGGTCGGTTGGTTTGGCCTATTTTTTATGATGTGGAGCCTTCAGAAGTGCGACATCAAAAAGATCACTATGAACAAGCATTATCTATGCATATAAAAAATCTAAGGGCTGATGAGGAGAAGATACGCAGTTGGAAGCTTGCATTGCATGAAGTGTCTAATATTTCTGGTCACCATTTTAATCCACGGCAAGGTTATGAATATCAATTTGTTGAAAAGATTGTGAAAGAAATCTCTAGTATAATCAATAGGGTTCCTTTACATGTTTCTCAGTATCCTGTTGGGCTAGCGTCTCGAGTGGAAGAAATAACCTCTCTATTACAAATTGGGTCAAATGACAAGGTTATCATGGTAGGTATTTGTGGAATTGGGGGAGTGGGTAAAACCACTATAGCACGTGCTTTGTATAATTCAATTGCAGATAATTTTGAAGGTTTGTGCTTTCTCCATGATGTCAAAGGAAAATCAAAGAAACTTGGCGTAGAAGGAATTCAAGAGATAATACTTTCAAAGATTGTAGGAGTGGACATCAAAATGCAGGATGTTAATGAAGGAGTTCAAGTAATAAAAGAGAGAGTCAAAGAAAAGAAAATTCTTTTGATTCTCGATAATGTTGAAAATCATGAGCAATTGAAAAAATTAGCTGGTGGTTGTGATTGGTTCAATGCTGGGAGTAGGATCATTATAACGACAAGGGATGAACAATTGCTTGTAGCACATGGGGTTGCAAGTATATACGACATGGAGGTTTTCAATGCTGAAGAATCTCTTGAATTGTTGAGCTGGAATGCTTTTAGAAATGCCCAAGTAGATCCAGGTTACAAGGATGTTTTGAATCGTGCAGTAACTTATGCACAAGGCCTTCCACTTGCCCTTGAAGTAATAGGCTCTAACTTGTGTGGAAAGACTATAAATGAATGGGAATCTGCGCTTGAGGCATATAAATTAAGCCCCCATAAAGACATTCAACAAGTATTGAGGTCGAGTTATGAGACTTCAGACAATTTGGGCATTTTGAATCTTGATCGTTGCAAATATGTTAAAAAGATACCTAATCTATCGAATGTCAGAAATTTGAAGAAATTAAGCCTTACGTATTGCAAGAATTTGATTGAAATTCATGATTCAATTGGCTATTTACCAAAACTTGAGATCTTGGATGTCGAAGCTTGTGTCCGGCTGAAGACCTTCCCACGTGCCATCAAGTTACCCTCTCTTACACGACTCAATCTTAGTTTCTGCTCAAGTATGAAGTACTTTCCGGAAATACTTGAAAAAGTGAAAATAGAAGTGCTACTTTTATATGGAACCGGAATAGAAAGATTGCCTTGGTCAATTTGCAATCTTTCTAAGCTTAGGGTGTTCAGTAATGGTGGGCAAAAGTCAGTCATTGAGATCCCAAATAGCATTTTTCTATTGCCGGAATTAGAAGACGTCAAATTGTATAGTGCAATTATTGATCGGAAGGTGATATCATGTAATTCGAAGGAAGGACAAGAGCATGCAATTTGGTCCAAGCAATGTCCCAACAGAGTTCAGTTTGATCTCCCAAGATGTAATATATCAGATGATGTCCTTAGAACTGATCTTAGTCGATATATGAATGTCCTGGGGTATTTGAACTTATCGGGTAATGATTTCACAATTTTGCCGGCATGGATGAAAGAATGTCCTTTCTTGGAGAAACTTTTTTTAAATGAGTGCAGGCATTTGAGAGAAGTCGAAGGGATCCCACCAAACATAAGTTGGTTAGAAGCAAGAAACTGTGTGTCATTGAGTTCAAAGTCCAAAAGCATAATATCGAGTGAGATATTACATGGGGCTCTTCTCAGATATCATAGTTCACAGAGCGGACGGTACCTTTTTTGTGTGCCGAGTAGAAGGATACCGGAGTGGTTTGATCAGAGAAGCAAAGGAGGTTCTATTTCTTTTTGGTTTCGTAACTCCTTCCCACCTCTATGCCTATGTTTTCTTCTTAAACCAGGGGATGTTATATGCTTTGATGTGCCGGTGGAAATCGATGGGAAAGGAGAATTTTTTCGTTCTTTTAGTGAAACTTCATCTGCTGTTGATGATCATTTATACTTGTTCTGTCTAAGAAGGGATCATATACACCGATATAATCGGTGGTATCATGCACAGGTTTGTATGTCATATAAATGTGATAAAGGCAGGGTTATAGAAGAGATGGGGATGTATGTAATCAAAGAACTTTGTAAGATGGAAGATATCAGTTTTACAAATCCTTATCATCAAACATTGGATTCCGATTGTGGTAACCAAGTAGAACAAGTGGGTACAAGGATGGAGGAGAAAGAAGTAGCATTTAATAAAAAAAGAGGGTTGATGGGGGATGACACTTTTACCTCGAGTTCGACTGCCTTGACATCCACAATGAGAGCAACAAATAGCCCAACTAATCTGAATGACTGCAACGCAATCACACCTCAAGTCCCATTTGATCAAGCTTCATCAGAAGCATCCTTGCTGGTACCCTGTTCACCACCAATGTTGCGACGGAGAAAATGCGTTTGCGACACCTTAAGAAGAAACCAAGGTAAAACGATGCCAAATTTCAAGTGGCAATCCTTGCATTCCTCTTGGCAAACATTTAATTATGATGGTCAATCTCCAAGAACTTTAGCAACAAAAAGATGCAACAACTTCCGCCAATGTTGA 2982 0.385 MTELASTSSSFHYQWTYDVFINFRGEDTRHGFIGNLYNALKKTGVRTFLDDAELRRGDEITPTLLKSIEDSRMAITVFSKNYASSTFCLNELVEIHECIKRKGRLVWPIFYDVEPSEVRHQKDHYEQALSMHIKNLRADEEKIRSWKLALHEVSNISGHHFNPRQGYEYQFVEKIVKEISSIINRVPLHVSQYPVGLASRVEEITSLLQIGSNDKVIMVGICGIGGVGKTTIARALYNSIADNFEGLCFLHDVKGKSKKLGVEGIQEIILSKIVGVDIKMQDVNEGVQVIKERVKEKKILLILDNVENHEQLKKLAGGCDWFNAGSRIIITTRDEQLLVAHGVASIYDMEVFNAEESLELLSWNAFRNAQVDPGYKDVLNRAVTYAQGLPLALEVIGSNLCGKTINEWESALEAYKLSPHKDIQQVLRSSYETSDNLGILNLDRCKYVKKIPNLSNVRNLKKLSLTYCKNLIEIHDSIGYLPKLEILDVEACVRLKTFPRAIKLPSLTRLNLSFCSSMKYFPEILEKVKIEVLLLYGTGIERLPWSICNLSKLRVFSNGGQKSVIEIPNSIFLLPELEDVKLYSAIIDRKVISCNSKEGQEHAIWSKQCPNRVQFDLPRCNISDDVLRTDLSRYMNVLGYLNLSGNDFTILPAWMKECPFLEKLFLNECRHLREVEGIPPNISWLEARNCVSLSSKSKSIISSEILHGALLRYHSSQSGRYLFCVPSRRIPEWFDQRSKGGSISFWFRNSFPPLCLCFLLKPGDVICFDVPVEIDGKGEFFRSFSETSSAVDDHLYLFCLRRDHIHRYNRWYHAQVCMSYKCDKGRVIEEMGMYVIKELCKMEDISFTNPYHQTLDSDCGNQVEQVGTRMEEKEVAFNKKRGLMGDDTFTSSSTALTSTMRATNSPTNLNDCNAITPQVPFDQASSEASLLVPCSPPMLRRRKCVCDTLRRNQGKTMPNFKWQSLHSSWQTFNYDGQSPRTLATKRCNNFRQC 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2296 993 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 185 - -
Acco01g2296 993 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 423 692 IPR044974 GO:0006952
Acco01g2296 993 SUPERFAMILY L domain-like 434 702 - -
Acco01g2296 993 Gene3D - 352 432 IPR042197 -
Acco01g2296 993 Gene3D Ribonuclease Inhibitor 594 715 IPR032675 -
Acco01g2296 993 Gene3D - 184 345 IPR027417 -
Acco01g2296 993 Pfam NB-ARC domain 201 433 IPR002182 GO:0043531
Acco01g2296 993 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 432 IPR027417 -
Acco01g2296 993 Gene3D - 13 183 IPR035897 -
Acco01g2296 993 PRINTS Disease resistance protein signature 386 400 - -
Acco01g2296 993 PRINTS Disease resistance protein signature 218 233 - -
Acco01g2296 993 PRINTS Disease resistance protein signature 502 518 - -
Acco01g2296 993 PRINTS Disease resistance protein signature 293 307 - -
Acco01g2296 993 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Acco01g2296 993 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 158 IPR035897 -
Acco01g2296 993 SMART till_3 16 156 IPR000157 GO:0007165
Acco01g2296 993 Pfam TIR domain 17 180 IPR000157 GO:0007165
Acco01g2296 993 Gene3D Ribonuclease Inhibitor 433 593 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2296 Acco-ChrAcco01 39006848 39013383 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2296 437 592 WRKY Transcription Factor Family AT4G12020 32.065 3.42e-08 55.8