Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2268 ATGGAACCTACGTCTGAAGGTGGCAGCGGAGGCGGTGGGCTTTCCCGGGTCCGTTCAACTCCGGCGACGTGGTTAGAAGCACTGCTCAAGGAGGAAGATGAAGAAGACCCATTGGGTACCACCCAGTGCTTCACTCAGCTGCTTGCTGCTGGTACCGATAGTTTGTCTAGAAATACGGCGTCGCTCGATTCGCCGGCGGCTGATGGAGGCGGTTTCGATGCTGGCTCATCGTCACGTGGATTTTCCCGGCAGAATAGTTCTCCGGCGAACTTATTCGGGCATTCAATGGTTTCCTCTGAAACAGGGTTCTTCCCCAAGTATGGGGTTCCATACAATCATGACGTTAGCCCACAAGACACCGATGTTTCTTCCATGGCTAATTTTAAACCAATCAGACAGAATGTTGAGCATACTGGCAAAACACCAGACATAGACATTGATAAGATTTTGGAGTATTCAGTACCTTGTAGAGTTCGGGCAAAGCGTGGACATGCTACACATCCAAGGAGTATTGCTGAAAGGGTTCGTAGAACTCGGATAAGTGATCGCATACGGAAGCTTCAAGAACTTGTGCCAAACATGGATAAGCAAACAAATACTGCAGAAATGTTAGACGAGGCTGTAGCATATGTGAAGTCTCTGCAGAAGCAAATCGAGGCACTCACAGAGCATCAACGAAAATGCAACTGCACAGCGAAAGAGTAA 705 0.4865 MEPTSEGGSGGGGLSRVRSTPATWLEALLKEEDEEDPLGTTQCFTQLLAAGTDSLSRNTASLDSPAADGGGFDAGSSSRGFSRQNSSPANLFGHSMVSSETGFFPKYGVPYNHDVSPQDTDVSSMANFKPIRQNVEHTGKTPDIDIDKILEYSVPCRVRAKRGHATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKSLQKQIEALTEHQRKCNCTAKE 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2268 234 MobiDBLite consensus disorder prediction 1 20 - -
Acco01g2268 234 MobiDBLite consensus disorder prediction 56 85 - -
Acco01g2268 234 FunFam Transcription factor bHLH130 family 165 233 - -
Acco01g2268 234 Pfam Helix-loop-helix DNA-binding domain 169 215 IPR011598 GO:0046983
Acco01g2268 234 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 163 228 IPR036638 GO:0046983
Acco01g2268 234 Coils Coil 204 224 - -
Acco01g2268 234 SMART finulus 170 220 IPR011598 GO:0046983
Acco01g2268 234 Gene3D - 161 234 IPR036638 GO:0046983
Acco01g2268 234 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 164 214 IPR011598 GO:0046983
Acco01g2268 234 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 73 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2268 Acco-ChrAcco01 38714780 38719023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2268 16 234 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 46.914 2.69e-54 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco01g2268 HLH 9.9e-10 No_clan