Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2265 ATGGATAGTGATAGCTCGCAATCTTGCTCATTGTGCAGGCACAAAGGTAGTATATGCAAAGAGGAATGTGAATACAGGCAGATTTTCCCAGGAAATAGGTACCAAGAGTTTGAGAAAGCAAAATGGCTGTTTGGTTTGAAAAACATGCTCACTGTAATTCAAAGTGTGGAGGCAAATCAAAGACAAGTTGCTGCAGATTCTATGTTTATGGAGGCTAATGCCTGGAGGAACCACCCTGTTGAAGGGGCTCTTGGCTTTGCTTCTGAACTCATTTCTCAGATTCACTCTCTCTGCAATCAACTTCAAGCAGCTAAGCAACAACTTGAGATCTTCAAGCTTCAACATTATGATAATAATAATGGCCTTCAAACAGTGCCTATTTCTTCTTCACCATTTGCTGCTTCTTCCTCCTTCTCTTCTGGAATTCCTGTGCAGCCTAGCCAGCTTCATCGTTCTGCTGACATATGTAGTACTATTATGGAAGGGATTGTTTCGTGTGAAGAAGTGAAGTCATTAGATGTCCAACAAATCACGAGCCTCCTTCAATATTACAGGCGTGGGAGGGGTCGACAAACCAGCAACGAGACTAAGGTGCAAAAGAGGGATCAAAGGAATACTGTTGGGAGAGATGGAGAAATTGCCAATGCAGAAGTTTCAGAAGATGAAAATTAG 672 0.4226 MDSDSSQSCSLCRHKGSICKEECEYRQIFPGNRYQEFEKAKWLFGLKNMLTVIQSVEANQRQVAADSMFMEANAWRNHPVEGALGFASELISQIHSLCNQLQAAKQQLEIFKLQHYDNNNGLQTVPISSSPFAASSSFSSGIPVQPSQLHRSADICSTIMEGIVSCEEVKSLDVQQITSLLQYYRRGRGRQTSNETKVQKRDQRNTVGRDGEIANAEVSEDEN 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2265 223 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Acco01g2265 223 MobiDBLite consensus disorder prediction 188 223 - -
Acco01g2265 223 Coils Coil 87 114 - -
Acco01g2265 223 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Acco01g2265 223 MobiDBLite consensus disorder prediction 190 208 - -
Acco01g2265 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2265 Acco-ChrAcco01 38676191 38680205 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2265 6 108 AS2 family AT3G50510 34.951 5.04e-16 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco01g2265 LOB 3.4e-22 No_clan