Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2255 ATGGGACGTTCGCCCTGTTGCGAGAAAGCCCATACAAATAAAGGTGCTTGGACTAAAGAGGAAGACCAACGCCTTATTGATTATATTCGCATCCATGGCGAAGGCTCTTGGCGTTCTCTTCCTAAAGCTGCTGGATTGCTCAGATGCGGAAAGAGTTGCAGATTGAGATGGATTAACTACCTCCGTCCTGATCTCAAACGAGGAAATTTCACTCAAGAAGAAGACGACCTCATCATGAAGCTTCATAGTCTACTTGGAAACAAATGGTCTCTTATTGCGGCGCGATTACCTGGGAGAACCGACAATGAGATCAAGAATTACTGGAATACTCATATAAAGCGCAAGCTCATCGGCCGCGGGATCAATCCCCAAACGCACCGTCCTCTCAACGAAACCACCGTCTCTGTAAAATCCACCGCCGAGTGGGAATTCAAGAACTCTCCGGCAGCGAAAAACGACTTCCTCGTGAAGAAGCAGAAGCAGGAGAGAGATAATTTCAATTTCAATTGCATCGATTTCGGAAGCATCAAGGCGGTTGAGGAATTGAACAACACTATTAGTGGCACCACTTCAGAGGAAGAAGAACCGCCATTACTGGATCGAGATTCTTCGCTACATGGTGGTGATGCTGGTGGTGAGCCTGATCTAGAGCTCTCGATTGGTCTCGTGCCATTTCACTCCGAGTCAGCTCGTACAGCGCAGGGGAAGACGGTGGCTCAAACAGCGGCGTGCCGGAGTTGGCAATTCGATTTTCAGAGGTGGGGAAGTGTATAG 774 0.4858 MGRSPCCEKAHTNKGAWTKEEDQRLIDYIRIHGEGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTQEEDDLIMKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLIGRGINPQTHRPLNETTVSVKSTAEWEFKNSPAAKNDFLVKKQKQERDNFNFNCIDFGSIKAVEELNNTISGTTSEEEEPPLLDRDSSLHGGDAGGEPDLELSIGLVPFHSESARTAQGKTVAQTAACRSWQFDFQRWGSV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2255 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco01g2255 257 MobiDBLite consensus disorder prediction 188 213 - -
Acco01g2255 257 CDD SANT 69 112 IPR001005 -
Acco01g2255 257 MobiDBLite consensus disorder prediction 194 208 - -
Acco01g2255 257 CDD SANT 16 61 IPR001005 -
Acco01g2255 257 FunFam Myb transcription factor 68 137 - -
Acco01g2255 257 SMART sant 66 114 IPR001005 -
Acco01g2255 257 SMART sant 13 63 IPR001005 -
Acco01g2255 257 Gene3D - 68 142 - -
Acco01g2255 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco01g2255 257 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco01g2255 257 FunFam MYB-related transcription factor 13 66 - -
Acco01g2255 257 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Acco01g2255 257 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco01g2255 257 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco01g2255 257 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Acco01g2255 257 Gene3D - 14 66 - -
Acco01g2255 257 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2255 Acco-ChrAcco01 38576574 38577600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2255 1 247 MYB Transcription Factor Family AT4G09460 56.855 3.12e-87 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco01g2255 Myb_DNA-binding 5.2e-15 CL0123