Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2236 ATGTACCCAAAACGGTCTAACCAAGGTGATGGACCTGGTTCCAGACCAGTCCGATCTAGCGATAGGATCAAGACGAGGCCGAACATTTATGGTCGACCATACTTATATTACAGCTCAAAGCACACCAGGAAAAGCAAGAACAAGACCAGGACAGCAGCTTCACAAATTGCCAAGATGTTGCGGCCAAGGGATCGGCTGGCACAAGATTCAAATGCTTCTAACTCTGCAGCCACTAATCTTCGACGCTCAACTAGGAAGAGAAGGATTTCTGTAAATCTTGAAGGTTTCACTGACAGTTCTGGAGCTGAGGATGAAGACTTGATGAGGCCCACATATCAACAACCGAGAAAGCAGATTGACCGAAGTGTTAGTCATGATGAGTTGAGGTCTCGCAAACACAAAAAAGCTGTGGAAACTAAATCAAACCCTCGACGTGAAGGTCTGCGGCCTCGTCGTTCAAAGGCTGTTGTAAGAGAACCCTTAAATTCTGAATCTGATGATGAGCAAGGTTTTTCAGAAGAGAAGGATGGACAGGATGAAACAGAAAATGGGAATGATTTGGAGGAAAATGATGCAGATGATGGTCAGAATGAGATTGAAGGAGATGCCGAGGGTGAAGATGAAGGTGATGATGAGGATGAGGATGAAGGAGATGAAGATGGTGATGGTGATGATGAAGATGGTGAAGAAGAGCAGGATGGAAGAAGACGCTATGATCTTCGAAATCGTGCAGATGTTCGCAGATTCTCGATGGAAGAAGGGAAGGCCCGACCAAGGTCACCCCGAAGAGTGTTACATCAAGGTATGGGCACTAAGGTTGGCAGGGATGTCAGGAAGGGTGGATCAAGAGTTCATAAGCGATATCGTTTAGCAAGACCTGAAGATTCTGATGACTCCATTCTTGTGGATGAACTGGATCAAGGCCCTGCTATTCCATGGGGTCGAGGTGGCAGCAGGTCTGGCCCACCTTGGCTTTTTGGGGGATTAGACACACATGGAACAACAGCATGGGGATTGAATCTTGCTGCATCAGGTTGGGGTCATCAAGGTGATGCTTTAGCTACATTGACTTCTGGGATTCAATCTGCTGGACCAAGCTCAAAAGGGGGTGCAGATATTCAACCATTACAGGTTGATGACAGTGTTAGTTTTGATGACATAGGTGGGCTCTCAGAATATATTGATGCTCTGAAGGAAATGGTTTTCTTTCCGTTACTGTATCCAGATTTCTTTGCAAGTTATCATATTACTCCTCCTAGAGGGGTGTTGTTATGTGGGCCCCCTGGCACAGGAAAAACACTAATTGCGAGAGCTTTAGCTTGTGCTGCATCAAAAGCTGGTCAGAAGGTTAGCTTTTACATGCGCAAGGGAGCAGATGTACTAAGCAAGTGGGTTGGTGAGGCTGAAAGACAATTGAAATTACTCTTTGAGGAAGCACAAAAGAATCAACCTTCAATTATTTTCTTTGATGAAATAGATGGACTTGCTCCTGTGAGGTCTAGCAAGCAAGAACAGATTCACAATTCTATTGTGTCGACTTTGCTTGCTTTGATGGATGGTCTTGATTCTCGCGGACAAGTTGTTTTAATAGGGGCCACCAATAGGATTGATGCTATTGATGGGGCCTTGCGCCGCCCTGGTAGATTTGACCGTGAATTTAACTTTCCCTTGCCTGGTTGTGAGGCACGTACTGAAATATTGGACATTCATACCCGTAAGTGGAAGCATCCTCCTTCAAAGGAACTGAAAATGGAGCTTGCTGCTAGTTGTGTAGGATACTGTGGTGCTGACCTGAAGGCTCTCTGTACTGAAGCTGCCATTCGTGCTTTTCGTGAAAAATATCCACAGGTTTATATGAGTGATGACAAATTCTTAATAGATGTCGATTCTGTCAAGGTAGAAAAGTATCACTTTGTTGAAGCAATGTCAACAATAACTCCTGCTGCTCATAGGGGTGCAATTGTACTCTCTAGGCCATTGTCTCTAGTTGTTCAACCATGCCTACAAAGACATCTAGAGGAAGCCATGAAAATTATATCTGATATTTTTCCTCCAGTTGCTGTTACATCAGAATTGTCCAAACTTTCTATGCTTTCCTATGGTTCTGCTATTCCACTTGTCTATAGACCTAGGCTTCTACTTTGTGGTGGTGAAGGTACCGGTCTGGATCATCTTGGGCCTGCAGTTTTACACGAACTGGAAAAATTTCCTGTTCATTCATTAGGACTTCCATCTCTCTTGTCGGATCCTAGTGCTAAGACGCCAGAGGAGGCTTTAGTACATATATTTGGTGAAGCTAGAAGAACAACCCCATCTATTCTCTATTTACCACAATTCAACGTTTGGTGGGAAACTGCACATGAACAGCTCAGGGCCGTTCTCCTGACTTTGCTAGAAGAATTGCCTTCTGACATCCCTATTTTATTACTTGGAACATCATCAGTGTCGCTTGATGAAGTTGATGAAGTGCCTTCTTCATTGTTTCCTTCTCGATCTGTCTATAACATGAACTTACCATCTACTGAAGATAGAACATCATTTTTCAATTGTTTGATCGATGCTGCTTTATCAGTCTCATTGGAGAGAACGAGCAAAAAATCCCAAGAAACAGATTCTCTTCCTGAACTTCCCAAGGCACCAAAATTAGCAGGTGGTATGAAGGTATCTGAGCTCAAAGCAACGGTTGAAGCTGAGCAGCATGCCCTTCGCAGATTGCGAATGTGCCTTAGAGATGTTTGCAACCGGATATTATACGACAAACGATTTATTGCCTTCCATTATCCGGTATCAGATGAAGATGCACCTAACTATCGTTCAATAATTCAGAACCCGATGGACATTGCTACCATACTGCAGCATGTTGATAACGGTCAATATATTACATGTTCAGCATTCTTACAGGACATTGATCTTATTGTTTCCAATGCTAAGGCTTATAATGGAGAGGACTACAATGGTTCAAGGATTGTCAGTAGAGCTTGTGAACTCCGTGATGCAGTGGATGGAATGCTCTCACAGATGGACCCAGCCCTGGTTGCATACTGTGACAAGATTGCTGCCCAAGGTGGCCCAGTTAATTTGCCTGATGGATTCAGTGGTTCTACTTTCCCATCTAGTCCTGTTGTTCAGCTGGGAACCACCACTAGAACGAGTGCTCGGCTTCGTAATGTCCAACCTGAGGTTAATATGGATCAAAGCTATGAAGTATTGAAGCGGACGAAAAGGAGCACTGATTTCACACATGCAGGAGATGACAAGTCACGGCAAGATCCTCTTCCCCCGAAGATTTTACCAGAACAGCAGGCCAGTGAAGTGGCTTGTGAAGGGCCTGAACCTGCTTCAGTTGATGAAAATCTACATGGAACCAGTACATGTGAACAAGTGGATGATAGTAGCGGCGTAGACGTCACAATGTCTGATGCTGAGTTTTCCAGCCAAGTGGAGTCTGTGAAGCAACTTTTTGTGAAGCTTAGTGAAAACTACAACATTCCGCAGCTTGAAAGGATTTACACAAGAATCATGAAGGGTATTTTTGAAGCCGAAGGCAAAGGAACGAAAAATCTCAAGACTTGGGTGTTGAAGTTTTTGTTTACATTTGTAGAAGATGACGCAAATTTCTAA 3621 0.4391 MYPKRSNQGDGPGSRPVRSSDRIKTRPNIYGRPYLYYSSKHTRKSKNKTRTAASQIAKMLRPRDRLAQDSNASNSAATNLRRSTRKRRISVNLEGFTDSSGAEDEDLMRPTYQQPRKQIDRSVSHDELRSRKHKKAVETKSNPRREGLRPRRSKAVVREPLNSESDDEQGFSEEKDGQDETENGNDLEENDADDGQNEIEGDAEGEDEGDDEDEDEGDEDGDGDDEDGEEEQDGRRRYDLRNRADVRRFSMEEGKARPRSPRRVLHQGMGTKVGRDVRKGGSRVHKRYRLARPEDSDDSILVDELDQGPAIPWGRGGSRSGPPWLFGGLDTHGTTAWGLNLAASGWGHQGDALATLTSGIQSAGPSSKGGADIQPLQVDDSVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQKNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARTEILDIHTRKWKHPPSKELKMELAASCVGYCGADLKALCTEAAIRAFREKYPQVYMSDDKFLIDVDSVKVEKYHFVEAMSTITPAAHRGAIVLSRPLSLVVQPCLQRHLEEAMKIISDIFPPVAVTSELSKLSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFGEARRTTPSILYLPQFNVWWETAHEQLRAVLLTLLEELPSDIPILLLGTSSVSLDEVDEVPSSLFPSRSVYNMNLPSTEDRTSFFNCLIDAALSVSLERTSKKSQETDSLPELPKAPKLAGGMKVSELKATVEAEQHALRRLRMCLRDVCNRILYDKRFIAFHYPVSDEDAPNYRSIIQNPMDIATILQHVDNGQYITCSAFLQDIDLIVSNAKAYNGEDYNGSRIVSRACELRDAVDGMLSQMDPALVAYCDKIAAQGGPVNLPDGFSGSTFPSSPVVQLGTTTRTSARLRNVQPEVNMDQSYEVLKRTKRSTDFTHAGDDKSRQDPLPPKILPEQQASEVACEGPEPASVDENLHGTSTCEQVDDSSGVDVTMSDAEFSSQVESVKQLFVKLSENYNIPQLERIYTRIMKGIFEAEGKGTKNLKTWVLKFLFTFVEDDANF 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2236 1206 Gene3D - 687 854 IPR027417 -
Acco01g2236 1206 MobiDBLite consensus disorder prediction 1074 1092 - -
Acco01g2236 1206 MobiDBLite consensus disorder prediction 1 241 - -
Acco01g2236 1206 Gene3D - 894 1022 IPR036427 GO:0005515
Acco01g2236 1206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 706 855 IPR027417 -
Acco01g2236 1206 MobiDBLite consensus disorder prediction 166 229 - -
Acco01g2236 1206 Pfam AAA+ lid domain 585 621 IPR041569 -
Acco01g2236 1206 Pfam ATPase family associated with various cellular activities (AAA) 422 557 IPR003959 GO:0005524|GO:0016887
Acco01g2236 1206 FunFam ATPase family, AAA domain-containing 2 380 563 - -
Acco01g2236 1206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 381 646 IPR027417 -
Acco01g2236 1206 MobiDBLite consensus disorder prediction 119 165 - -
Acco01g2236 1206 SUPERFAMILY Bromodomain 901 1013 IPR036427 GO:0005515
Acco01g2236 1206 SMART AAA_5 418 559 IPR003593 GO:0016887
Acco01g2236 1206 FunFam ATPase family AAA domain-containing protein 2B 558 643 - -
Acco01g2236 1206 Pfam Bromodomain 916 983 IPR001487 GO:0005515
Acco01g2236 1206 Gene3D - 380 650 IPR027417 -
Acco01g2236 1206 CDD Bromo_AAA 902 1012 - -
Acco01g2236 1206 ProSiteProfiles Bromodomain profile. 925 987 IPR001487 GO:0005515
Acco01g2236 1206 FunFam ATPase family AAA domain-containing protein 894 1022 - -
Acco01g2236 1206 SMART bromo_6 902 1009 IPR001487 GO:0005515
Acco01g2236 1206 PANTHER AAA DOMAIN-CONTAINING 41 1019 IPR045199 -
Acco01g2236 1206 ProSitePatterns AAA-protein family signature. 527 545 IPR003960 GO:0005524|GO:0016887
Acco01g2236 1206 Gene3D - 558 643 - -
Acco01g2236 1206 PRINTS Bromodomain signature 968 987 IPR001487 GO:0005515
Acco01g2236 1206 PRINTS Bromodomain signature 934 950 IPR001487 GO:0005515
Acco01g2236 1206 PRINTS Bromodomain signature 950 968 IPR001487 GO:0005515
Acco01g2236 1206 MobiDBLite consensus disorder prediction 1074 1095 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2236 Acco-ChrAcco01 38304367 38311413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2236 368 616 Calmodulin-binding Proteins AT3G56690 37.154 5.21e-41 162