Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2202 ATGGAAGACGTACAAGTACACCTGCCAGGCTTCAGATTTCACCCCACAGAAGAAGAACTCCTTGATTTCTACCTTAAGAACATGATCACCGGCAACAAGCTCTGCCTTGACGTCATCCACTTCCTCAATATCTACCTCTACGATCCCTGGGATTTGCCCGCCATGGCCAACGTCGGCGAGCGAGAGTGGTACTTCTTCGTCCCCCGCGACAAGAAACATGGCAGCGGCGGCAGGCCCAACCGCACCACCCAGAGAGGCTTCTGGAAGGCCACTGGCTCCGACCGCAAGATCCACAGCCTCTCCCACCCTAAGCGCCTCATCGGCCTCCGCAAGACCCTCGTCTTCTACCAGGGCAGAGCTCCCCGCGGCTCCAAGACCGATTGGGTCATGAATGAGTACCGCCTCCCCGACACTTTCCACTTACCCAACAAGGATGCCATAGTATTGTGCAAGATATACCGGAAGGCCACGCCGTTGAAAGTGCTGGAGCAGAGGGCGTCACTGTGCGAGTCTTCCTCCTCGTCCATGCCCACTACCTTCGAACCCAAGATGGAGCACGTAGAAGAGACGGAGGAAGTGGCAGCGGTGGCTAAGGTCAACCTACCGGAGCTGCAATTACCCATGAACATGGGGTGGAACCAAGACCCCGCTTGGCCTCAGTTAAACAGCCCTTGGCTCCAGTATTTCACTCCCCTCACCATTTCCAACCTGTTAAGTGCCTCTTTGGATTAG 732 0.5601 MEDVQVHLPGFRFHPTEEELLDFYLKNMITGNKLCLDVIHFLNIYLYDPWDLPAMANVGEREWYFFVPRDKKHGSGGRPNRTTQRGFWKATGSDRKIHSLSHPKRLIGLRKTLVFYQGRAPRGSKTDWVMNEYRLPDTFHLPNKDAIVLCKIYRKATPLKVLEQRASLCESSSSSMPTTFEPKMEHVEETEEVAAVAKVNLPELQLPMNMGWNQDPAWPQLNSPWLQYFTPLTISNLLSASLD 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2202 243 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 185 - -
Acco01g2202 243 FunFam NAC domain-containing protein 67-like 16 159 - -
Acco01g2202 243 Pfam No apical meristem (NAM) protein 9 135 IPR003441 GO:0003677|GO:0006355
Acco01g2202 243 Gene3D NAC domain 16 158 IPR036093 GO:0003677|GO:0006355
Acco01g2202 243 ProSiteProfiles NAC domain profile. 7 155 IPR003441 GO:0003677|GO:0006355
Acco01g2202 243 SUPERFAMILY NAC domain 5 155 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2202 Acco-ChrAcco01 37900332 37901185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2202 6 233 NAC Transcription Factor Family AT2G17040 54.545 1.85e-92 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco01g2202 NAM 2.8e-34 No_clan