Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2185 ATGGTGATGGGTCAGGCTGACCAGGACAGTGCCGCTAAAGTGCTTGCTACGTCTTCAATGCCTCAGAGTCAGAAGCTCCGAGTTTACCACGAGGTTCTTCGTCGCCTCAAGGATTCCAACCACGACGAGGCTATGCAGCCTGACTTCGACGATCAACTTTGGGGTCACTTCAACCGCCTCCCAACACGATATGCGTTGGATGTTAATGTTGAAAGGGCGGCAGATGTTCTCACGCATAAGAGATTATTGCATTTGGCCCGTGACCCTGCTAATAGGCCTGCAATTGAAGTTCGCCTAGTCCAGATTTACCCCATATCTGATGGGAACTCATCTGACTCCGTCCATTCAGATGTACCTAGGGAAGAAGTTTGTCAAACCTCTCCAAAGTACTCCAGGAGACTGAGTATCCATCCTCCTCCTGCTTTTGGTTCTTCCCCTAATCTTGAGGCCCTAGCACTTGAAGCTAATTCTGAAGACGAGGAACACACTGTGCATGGAAGTGCTAAATATTATCAGCCCATGCATGAAATCACCTTTTCTACAGATGACAAGCCAAAGCTTCTCAGTCAGTTAACTTCTTTGGTTGCTGAAATTGGTTTAAACATTAGAGAGGCACATGTCTTTTCGACTATTGATGGCTACTCATTAGACGTGTTTGTTGTTGATGGATGGCCCAACGAGGAAACACAGCAGCTTAAAGCAGCTTTGGAGAAAGAAGTATTGTCGATTGAGAGGCATGCACTTAGTATTCAGCAATCAGAATTTTATGCTGGTAAGACTGATCAAGTGGAGATGAAAAGCGAAGAAGGTCATTTGGTGATACCCAATGATGGGTCAGATGTTTGGGAAATAGAGCCTAAACATTTGAAGTATGGAAATAAAGTTGCATCTGGATCATTTGGTGAACTGTTTAGAGGCACTTATTGTAGTCAGGACGTGGCCATTAAAGTTCTCAAGCCTGAGAATGTAAGTTCAGATTGGAAGAAAGAGTTTTCCCAGGAAGTCTATATCATGAGAAAGGTTAGGCACAAGAATGTTGTGCAATTTATTGGAGCATGTACCAAGTCACCACACTTTTGCATAATAACAGAATTTATGAGTGGTGGAAGTGTGTATGACTTTTTGCATAAACAGAAGGGTGTTTTTAAATTTCCCTCCCTACTCAGAGTAGCAATTGATGTTTCCAAGGGAATGAATTACTTGCACCAAAATAATATTATCCATAGAGATTTGAAGGCTGCTAATCTTTTGATGGATGAAAATCACGTTGTCAAGGTTGCTGATTTTGGTGTTGCTAGAGTGAAAGATCAATCCGGAGTCATGACAGCAGAAACTGGTACATACCGATGGATGGCACCAGAGGTTATAGAACACAAACGATATGATCAAAAGGCTGATGTGTTTAGTTTTGGAGTTGTTTTATGGGAATTACTCACTGGAAAGCTTCCATATGAATATCTGACCCCACTACAGGCAGCAATAGGAGTGGTTCAGAAGGGCCTGCGACCCACGATCCCTAAGAACACACATCCAAAGTTTGTTGAGCTTCTTGAGAGGTGTTGGCAGCAAGATCCAACATTGAGACCTGATTTCAGTGAAATTATTGAGATCCTGCAGCAATTAGCTAACGAGGTTGGGAATGAAGGAGAGGAGAAGCGGAGGGAGAAATCTGGAGGATTTTTTTCTGCCCTCAGACGAGGCCATCACTGA 1710 0.4345 MVMGQADQDSAAKVLATSSMPQSQKLRVYHEVLRRLKDSNHDEAMQPDFDDQLWGHFNRLPTRYALDVNVERAADVLTHKRLLHLARDPANRPAIEVRLVQIYPISDGNSSDSVHSDVPREEVCQTSPKYSRRLSIHPPPAFGSSPNLEALALEANSEDEEHTVHGSAKYYQPMHEITFSTDDKPKLLSQLTSLVAEIGLNIREAHVFSTIDGYSLDVFVVDGWPNEETQQLKAALEKEVLSIERHALSIQQSEFYAGKTDQVEMKSEEGHLVIPNDGSDVWEIEPKHLKYGNKVASGSFGELFRGTYCSQDVAIKVLKPENVSSDWKKEFSQEVYIMRKVRHKNVVQFIGACTKSPHFCIITEFMSGGSVYDFLHKQKGVFKFPSLLRVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENHVVKVADFGVARVKDQSGVMTAETGTYRWMAPEVIEHKRYDQKADVFSFGVVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPKFVELLERCWQQDPTLRPDFSEIIEILQQLANEVGNEGEEKRREKSGGFFSALRRGHH 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2185 569 CDD STKc_MAP3K-like 295 538 - -
Acco01g2185 569 Gene3D Transferase(Phosphotransferase) domain 1 368 559 - -
Acco01g2185 569 MobiDBLite consensus disorder prediction 546 562 - -
Acco01g2185 569 ProSiteProfiles ACT domain profile. 176 251 IPR002912 -
Acco01g2185 569 SMART serkin_6 289 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2185 569 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 129 545 - -
Acco01g2185 569 PRINTS Tyrosine kinase catalytic domain signature 509 531 IPR001245 GO:0004672|GO:0006468
Acco01g2185 569 PRINTS Tyrosine kinase catalytic domain signature 465 487 IPR001245 GO:0004672|GO:0006468
Acco01g2185 569 PRINTS Tyrosine kinase catalytic domain signature 363 376 IPR001245 GO:0004672|GO:0006468
Acco01g2185 569 PRINTS Tyrosine kinase catalytic domain signature 446 456 IPR001245 GO:0004672|GO:0006468
Acco01g2185 569 PRINTS Tyrosine kinase catalytic domain signature 400 418 IPR001245 GO:0004672|GO:0006468
Acco01g2185 569 SUPERFAMILY Protein kinase-like (PK-like) 276 538 IPR011009 -
Acco01g2185 569 FunFam Serine/threonine-protein kinase isoform 1 279 367 - -
Acco01g2185 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 406 418 IPR008271 GO:0004672|GO:0006468
Acco01g2185 569 Coils Coil 226 246 - -
Acco01g2185 569 Pfam Protein tyrosine and serine/threonine kinase 289 538 IPR001245 GO:0004672|GO:0006468
Acco01g2185 569 Gene3D Phosphorylase Kinase; domain 1 279 367 - -
Acco01g2185 569 SUPERFAMILY ACT-like 174 238 IPR045865 -
Acco01g2185 569 MobiDBLite consensus disorder prediction 546 569 - -
Acco01g2185 569 ProSiteProfiles Protein kinase domain profile. 289 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2185 569 FunFam serine/threonine-protein kinase HT1 368 558 - -
Acco01g2185 569 CDD ACT_TyrKc 174 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2185 Acco-ChrAcco01 37763584 37769641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2185 12 568 MAP Kinase Kinase Kinase AT4G35780 64.821 0.0 731
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Acco01g2185 PK_Tyr_Ser-Thr 1.3e-75 CL0016