Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2184 ATGGATTTCTCCCTCAGGAAATCCTTCAAGTCCTATGGTTCCTACAAGCGTTCCTCAGGAGACAGCGCTGACGCCAGGCACGAAGAAGTCCCCATTCTCTACGAACAAGATCAATCTTCCCAACTTCACCTTCTTCACCCCCACGCCGCCGCCGCCGCCGCTCCTTCCTCCTCCATGAACTCCGCCGGCAGCCCCACCTACAGCGGAGAGGTGATCGTCAAGATCGACGATGGCGACTCCAGATCCTACAAAGCGGAGGCCTCCTCCTCCTCCCAGCAGGGCGAGGCCAAGCTTAGGCGGGACCCCGACTTCTGGAAAGAAGGTGATAGTACCGCCACCAAGAATGAAAAGAGTTTCGATTTCCAGCGACCTGATCCCAAACCCGACGACCCTCCCTCCAAGCTCATTGGTAATTTCTTGCACAGACAGCAGCTCTCCGGCGACATGTCCCTCGACATGGATTTGGAAATGGATGAGCTTCAACATGACCCTTACAAGACGTGTTTGCCTTCGCTCGATGAGAATGCGACGATGAGTTTCTCCAGGGAGCTTAAAGTCTCCTTCGAAGAACCGAGTCCTAATTCCGCCGGGGAACCTGCAGGCGATTCCGTTCGACGAAGGTACAAGGATACACCAAACATGGAGGAGTTCCCGAAACCACCTCAACCACCGCATTCAGACCGTCGCGGAGGCTCAAATCAGAATATTCATCCGGTAAACAGCGGAGACAGCGAGGTTGTGAGATGCACCTCAAATGCGTCTTTCGAGAGGAACCTTTCGTTGCAGAGGAAGTCTGGTTTGCTCAGAGCGAAAACCAAATCAAGACTTATTGACCCGCCCGATGAACCCGAACGGAAATCGGACCGGATTCAGAAATCGGGGCAGATTCAGAAATCAGGGCAGATTATGTCGGGTTTGCAGTCAGGGAATAATAAGAAAGGGGAGGAGGATGAGGAAGACCCATTTTTGGAAGAGGATCTTCCAGACGATTTCAAAAACACCAAATTCAGCATCTGGGTTCTACTAGAATGGTTGAGTTTGATCTTAATTGTAGCGGCATTGATAACCACTCTCTGCATCCCATTCTTAAGGGGGGAAAATTTATGGAAGCTCAAGTTATGGAAATGGGAGGTGATGGTCTTGGTTCTGATCTGTGGCAGGTTAGTTTCAGATTGGGTGATTCGAATTGCGGTGTACTTCATCGAAAGAAATTTCCTTCTACGTAAGAGGGTGCTCTACTTTGTATATGGTGTGAAGAAGGCAGTTCAAAATTGCCTCTGGCTGGGGCTTGTTTTAGTTGCATGGCACTCTCTGTTCGACAAAAAAGTGGAGAGGGAAACAAAAAACGACTTCCTAGAATATGTGACCAAAGTTTTGATATGCTTCTTGGTGGGAACTATAGTGTGGCTGGTGAAAACTCTAATGGTGAAGGTTCTGGCATCTTCGTTCCACGTCAGCACATACTTCGACAGGATTCAGGAATCTCTGTTCAACCAGTTTGTGATCGAAACCCTGTCGGGGCCGCCGTTGGTGGAGATGCAGCGGCAGGAGGAGGAGGAGGAGAAGCTAGCGGAGGAGGTGATGAAGCTTCAGAATGCAGGAATTACTATACCGCCTGATCTGAGGGCATCAGCTTTCTCTTCTTTTAAGAGCCCGACGAAGGTGAATAGGAGTGGGGTTCTAAAGAGTCCTCATTTGAAAAGTGGATTTTCTCGACCACTTTCGAAGAAGTCGGATGATGGTGGGATACCTATTGATTACTTGCATAAGTTGAATCCTAGGAATGTATCTGCATGGAATATGAAGAGGCTCATGAACATTGTGCGACATGGTGCTCTTTCTACTCTTGACGAGCAGATACAAGGTTCAACCTATGAAGATGAAAATACCACGCAAATCCGTAGTGAGAACGAGGCCAAAGCTGCTGCCAAAAAGATATTTCAGAATGTTACCAGGCGTGGATACAGGTTCATATACCTAGAGGACTTGGTGCGCTTTATGAGAGATGAAGAAGCTGTTAAAACCTTTAGTCTATTCGAAGGAGCACCTGATACAGGCAAAATCAGTAAATCGGCCTTGAAGAACTGGGTGGTGAACGCATTCAGAGAAAGGAGAGCACTTGCTTTAACGTTGAACGACACCAAAACGGCAGTAAACAAACTTCACCGGATGCTCAATTTTCTAGTGGCCATTATCATTCTCATCATTTGGCTCTTACTACTAGAAATTGCCACCAGCAAGTTTCTTGTCGTGGTGAGTTCCCAGCTCGTTCTTGCCGCATTCATATTCGGAAATACCTGCAAGACCATATTTGAAGCCATCGTTTTCTTATTTGTCATGCACCCTTTCGATGTGGGAGATAGATGTGAAATTGATGGCGTTCAGATGGTTGTGGAAGAAATGAACATATTGACAACCGTATTTCTGAGATACGACAATTTGAAAGTAACGATCCCTAACAATATTCTTGCTACCAAGCCTATATATAATTTCTACCGAAGTCCCGATATGGGAGAAGCTGCGGAGTTCGTGGTACATTTTTCCACCCCACCCGAAAAGATCACACTCATCATAAACAGAATACAAAGTTACATCGAAAGCAAGAAGGAGTTCTGGTATCCCTCACCTATGATAGTGTACAAGGACGTGGAAACACTAAACGCGATACAAATAGCAGTGTGGCCAAGTCACAGAATGAACCACCAAGACATGGGCGAAAGGTTTGTTAGAAGATCCCTTCTGATTGAAGAGATGGTCAAAATCTTCCGGGAGGTTGACATCCAGTTCCGGCTCCTTCCTCTCGATGTCAACATTCGAAGCACGCCCACCACCTCCGACCGCCTACCTCCGAGTTGGGTCACCGCTACAACTCAGGCTTGA 2880 0.475 MDFSLRKSFKSYGSYKRSSGDSADARHEEVPILYEQDQSSQLHLLHPHAAAAAAPSSSMNSAGSPTYSGEVIVKIDDGDSRSYKAEASSSSQQGEAKLRRDPDFWKEGDSTATKNEKSFDFQRPDPKPDDPPSKLIGNFLHRQQLSGDMSLDMDLEMDELQHDPYKTCLPSLDENATMSFSRELKVSFEEPSPNSAGEPAGDSVRRRYKDTPNMEEFPKPPQPPHSDRRGGSNQNIHPVNSGDSEVVRCTSNASFERNLSLQRKSGLLRAKTKSRLIDPPDEPERKSDRIQKSGQIQKSGQIMSGLQSGNNKKGEEDEEDPFLEEDLPDDFKNTKFSIWVLLEWLSLILIVAALITTLCIPFLRGENLWKLKLWKWEVMVLVLICGRLVSDWVIRIAVYFIERNFLLRKRVLYFVYGVKKAVQNCLWLGLVLVAWHSLFDKKVERETKNDFLEYVTKVLICFLVGTIVWLVKTLMVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEMQRQEEEEEKLAEEVMKLQNAGITIPPDLRASAFSSFKSPTKVNRSGVLKSPHLKSGFSRPLSKKSDDGGIPIDYLHKLNPRNVSAWNMKRLMNIVRHGALSTLDEQIQGSTYEDENTTQIRSENEAKAAAKKIFQNVTRRGYRFIYLEDLVRFMRDEEAVKTFSLFEGAPDTGKISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVAIIILIIWLLLLEIATSKFLVVVSSQLVLAAFIFGNTCKTIFEAIVFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTVFLRYDNLKVTIPNNILATKPIYNFYRSPDMGEAAEFVVHFSTPPEKITLIINRIQSYIESKKEFWYPSPMIVYKDVETLNAIQIAVWPSHRMNHQDMGERFVRRSLLIEEMVKIFREVDIQFRLLPLDVNIRSTPTTSDRLPPSWVTATTQA 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2184 959 PIRSF Memb_At2g17000 56 959 IPR016688 -
Acco01g2184 959 MobiDBLite consensus disorder prediction 270 326 - -
Acco01g2184 959 MobiDBLite consensus disorder prediction 183 245 - -
Acco01g2184 959 Gene3D - 782 831 IPR023408 -
Acco01g2184 959 MobiDBLite consensus disorder prediction 1 142 - -
Acco01g2184 959 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 53 952 IPR016688 -
Acco01g2184 959 MobiDBLite consensus disorder prediction 227 245 - -
Acco01g2184 959 Coils Coil 510 533 - -
Acco01g2184 959 MobiDBLite consensus disorder prediction 96 130 - -
Acco01g2184 959 FunFam Predicted mechanosensitive ion channel 782 831 - -
Acco01g2184 959 SUPERFAMILY Sm-like ribonucleoproteins 772 831 IPR010920 -
Acco01g2184 959 MobiDBLite consensus disorder prediction 293 310 - -
Acco01g2184 959 Pfam Mechanosensitive ion channel 724 929 IPR006685 GO:0016020|GO:0055085
Acco01g2184 959 MobiDBLite consensus disorder prediction 274 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2184 Acco-ChrAcco01 37750468 37754061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2184 70 952 Mechanosensitive Ion Channel Family AT1G78610 55.482 0.0 913