Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2175 ATGCCCCAGATTTCATCAGGGGAAAAAGAAAACAGTTCAAACATGGGTGTCACTCCAAACAATCTTGATTTGGAGGAGGGAACTTTGGAGATAGGAATGGAATACAGAACTGTATCTGGTGTTGCTGGACCATTGGTCATTCTGGACAAAGTTAAGGGACCCAAATATCAAGAGATCGTTAATATTCGTTTAGGAGATGGAACTACCCGACGTGGGCAAGTTCTAGAGGTCGATGGTGAAAAGGCTGTTGTTCAGGTTTTTGAAGGTACATCTGGGATTGACAATAAATTTACAACTGTGCAGTTTACTGGAGAGGTGTTGAAAACTCCTGTCTCACTGGACATGCTTGGACGCATATTTAATGGTTCTGGAAAACCTATTGATAATGGTCCACCCATATTGCCTGAGGCTTATTTGGATATATCAGGAAGTTCTATCAACCCTAGTGAGAGAACCTATCCAGAGGAAATGATACAGACTGGAATATCTACAATCGATGTCATGAATTCCATTGCTAGAGGTCAGAAGATTCCTCTTTTCTCAGCTGCTGGTCTTCCCCATAATGAAATTGCTGCTCAGATATGTCGCCAGGCTGGCTTAGTCAAGCGACTGGAGAAGTCTGATAACCTTCTTGAGGGTGGGGAGGAAGACAATTTTGCCATTGTGTTTGCAGCTATGGGAGTTAACATGGAGACTGCACAATTTTTTAAACGTGACTTTGAGGAGAATGGCTCGATGGAAAGAGTGACTCTTTTTCTTAATCTGGCAAATGATCCAACAATTGAGCGCATTATCACTCCTCGTATTGCTCTAACAACTGCTGAATATTTGGCTTATGAATGTGGGAAGCATGTTCTTGTGATACTTACAGATATGAGTTCTTATGCCGATGCTCTTCGTGAGGTATCTGCTGCTCGTGAAGAAGTGCCTGGAAGGCGTGGTTATCCAGGTTACATGTATACAGATCTTGCAACAATATATGAACGTGCCGGAAGAATTGAGGGGCGAACAGGCTCTATTACACAAATTCCAATTCTGACCATGCCAAACGATGACATCACCCATCCAACTCCTGATCTTACGGGATACATTACTGAGGGGCAGATATACATAGATAGGCAGCTGTATAACAGACAGATATACCCGCCAATCAATGTCCTTCCATCACTATCTCGGTTGATGAAGAGTGCCATTGGTGAGGGAATGACTCGAAGGGATCATTCTGATGTTTCGAATCAGCTCTATGCAAACTATGCCATTGGAAAGGACGTCCAAGCAATGAAAGCCGTGGTTGGAGAAGAAGCACTTTCATCTGAGGATATGCTGTATCTGGAATTTTTGGACAAGTTCGAGAGGAAGTTTGTTGCCCAGGGAGCTTATGACACCCGCAACATCTTCCAGTCACTAGACCTTGCATGGACTTTGCTTCGGATTTTCCCCCGTGAGCTGCTTCATCGTATACCAGCAAAGACTCTTGACCAATATTATAGCCGAGACGCCAGTAATTAG 1509 0.4361 MPQISSGEKENSSNMGVTPNNLDLEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRTGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLYNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDMLYLEFLDKFERKFVAQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQYYSRDASN 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2175 502 CDD V_A-ATPase_B 106 399 - -
Acco01g2175 502 CDD ATP-synt_V_A-type_beta_C 401 495 - -
Acco01g2175 502 MobiDBLite consensus disorder prediction 1 22 - -
Acco01g2175 502 Hamap V-type ATP synthase beta chain [atpB]. 32 500 IPR022879 -
Acco01g2175 502 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 161 391 IPR000194 GO:0005524
Acco01g2175 502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 397 IPR027417 -
Acco01g2175 502 Gene3D - 43 502 - -
Acco01g2175 502 Pfam ATP synthase alpha/beta family, beta-barrel domain 38 104 IPR004100 GO:0046034|GO:1902600
Acco01g2175 502 PIRSF V-ATPsynth_beta/V-ATPase_B 26 502 IPR022879 -
Acco01g2175 502 MobiDBLite consensus disorder prediction 1 21 - -
Acco01g2175 502 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 22 500 IPR022879 -
Acco01g2175 502 ProSitePatterns ATP synthase alpha and beta subunits signature. 382 391 IPR020003 GO:0005524
Acco01g2175 502 CDD ATP-synt_V_A-type_beta_N 34 105 - -
Acco01g2175 502 NCBIfam V-type ATPase subunit B 34 500 IPR005723 GO:0033180|GO:0046961|GO:1902600
Acco01g2175 502 FunFam V-type proton ATPase subunit B, brain 43 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2175 Acco-ChrAcco01 37675428 37683508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2175 13 502 Primary Pumps ATPases(2) AT4G38510 96.327 0.0 968