Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2172 ATGTTATCTCAGTTAATGAACTTTCTGCGGGCCTGCTTGTGGCCAAGTTCCCATCAAAATCCACGTACAGGTACAGATGCTGGAGGTCGACAAGATGGATTGTTGTGGTACAAAGACTCGGGGCAACACTTGAGTGGTGACTTTTCAATGGCTGTGATCCAAGCCAATAACTTGCTGGAGGATCAGAGCCAGATTGAATCGGGCTGTCTGAGCACCAGTGAATCTGGTCCTTATGGCACCTTTGTTGGTGTTTATGATGGGCATGGAGGCCCTGAGACATCGCGGTTTATTAATTATAACCTCTTTCACCATCTTAAGAGGTTTGCTGCAGAGCAGCAATCAATGTCAGTTGATGTAATTCGCAAGGCACTTCAAGCAACAGAAGAGGGATTTATGTCTCTTGTTGCCAGACAGTGGCCAATACAACCACAAATCGCTGCTGTTGGGTCATGCTGTCTTGTTGGTGTTATTTGTAATGGAACCCTTTATATAGCTAATCTCGGTGATTCGAGGGCTGTTTTGGGAAGAGTGGTCAAGGCAACAGGGGACGTACTAGCCGTGCAATTGTCAACAGAGCACAATGTGGGAATAGAGTCTGTAAGACAAGAGATGCATTCTTTGCACCCTGATGACTCACAAATCGTTGTTTTAAAACATAATGTATGGCGTGTAAAGGGCCTTATACAGATTTCAAGATCTATTGGTGACGTTTATTTGAAAAAGGCTGAGTTCAATAGGGAACCACTATATGCTAAGTTTCGACTTCGGGAGCCATTCAGTAGGCCGATACTAAGTTCAGAACCATCAATATCAGTGTGCCAATTGCAGCCACAGGATCAATTTATTATATTTGCTTCGGATGGGCTCTGGGAACACCTTAGCAATCAAGATGCAGTTGATATAGTTCAAAATAATCCTCATAGTGGAAGTGCAAGGAGGCTGGTGAAAGCTGCCCTTCAAGAAGCAGCAAAGAAGAGAGAAATGAGATATTCAGACCTAAAGAAGATTGATCGTGGGGTTCGTCGACATTTCCATGATGATATAACTGTGATTGTTGTGTTCTTGGACTCAAATCTCGTGAGTAGGGCTAGCTCTGTGAAGTGCAATGGTATATCTGTTAGAGGTGGTGGCATCAACCTGCCTCATAACACACTAGCACCTTGGACAACATCAGCAGAGGCTGGTGGTACCGGATTTAAGCTGTAA 1206 0.4428 MLSQLMNFLRACLWPSSHQNPRTGTDAGGRQDGLLWYKDSGQHLSGDFSMAVIQANNLLEDQSQIESGCLSTSESGPYGTFVGVYDGHGGPETSRFINYNLFHHLKRFAAEQQSMSVDVIRKALQATEEGFMSLVARQWPIQPQIAAVGSCCLVGVICNGTLYIANLGDSRAVLGRVVKATGDVLAVQLSTEHNVGIESVRQEMHSLHPDDSQIVVLKHNVWRVKGLIQISRSIGDVYLKKAEFNREPLYAKFRLREPFSRPILSSEPSISVCQLQPQDQFIIFASDGLWEHLSNQDAVDIVQNNPHSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASSVKCNGISVRGGGINLPHNTLAPWTTSAEAGGTGFKL 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2172 401 CDD PP2Cc 48 355 IPR001932 -
Acco01g2172 401 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Acco01g2172 401 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Acco01g2172 401 Pfam Protein phosphatase 2C 79 324 IPR001932 -
Acco01g2172 401 PANTHER PROTEIN PHOSPHATASE 45 353 IPR015655 GO:0004722|GO:0006470
Acco01g2172 401 FunFam Phosphatase 2C family protein 36 365 - -
Acco01g2172 401 SUPERFAMILY PP2C-like 55 356 IPR036457 -
Acco01g2172 401 SMART PP2C_4 37 353 IPR001932 -
Acco01g2172 401 Gene3D - 37 366 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2172 Acco-ChrAcco01 37659204 37661375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2172 1 398 PP2C-type Phosphatase Gene Family AT4G38520 73.367 0.0 630