Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2167 ATGAACACCGTCATGCAAAACCTATCTGAGAAATCGAGGCCTTTTGTGGGTTTAAATGCCTGGGACTACAGTCACTTTTCTGGGCTGGATGCATGCTCTTTTGCTGGCACCGAGAGTCGCCAAAATGGTGGAGACAAACTTCTTTTCTCTGTTTCTTCAGTTGCTCCATGCAGGGATACCATGTTTCATCACCCCAGAACAGAGTCCTAGACACTATCGTCCAACCAATCCAAATGGGTTAATCATACCAATAGCTTAGATTCAAATACTTCAGAACCTTTGATGCCAAACTCATTAGTCCATCAAGACGCCCATGCTCACAAAAATAATGGTGCTCAATTAGAGGATCAAGCAAAACGAAAGATTGATGATCAGAAGAACGTGGATCTTGACTGCCTCCAGGCGATCAGCCGTCACGACGCTGATGTGGATGAGAGGAACGGTGTGGTTGCTCCGTCGAGCACTGCCGATCTCAGTGAAAAGGAAGAGGCCGTAGCCTCATTTAAACTGTATATCTTGGTAACAGTGCTGGAAGATCATCGGGTGACGGATTTCGTCACATCCTACTGCAATCTAGCAGCGGAGAGGACTAAATCGATGAACCTTGAAGCAGAGATCAAGAGGAGGGAGAGGCTCAATACGAACTTGTTAAGTCTACGGTCTTTAGTTCCTAGAATTTCTGGGCCAGACAAAGCATCAATTATTGGAGACACAATTGAGTACGTGAAGGATTTGCAGAAGCAAGTGAAGCAGCTGGAGAAAATTTCAGAAGTGGACGAACAAGAAGCACCAGATAATGTTGTTGGGGTTGAAATGGGAACGAAAGCCGATCAAATAAAGACTCGAACACAGGAATTTGATGCTACACAGAATAAGCAGACACAACAGAAGGAGGCATCACATATACAAGATGCTGCATCTGGAGAGTTTTGA 933 0.4491 MNTVMQNLSEKSRPFVGLNAWDYSHFSGLDACSFAGTESRQNGGDKLLFSVSSVAPCRDTMFHHPRTESXTLSSNQSKWVNHTNSLDSNTSEPLMPNSLVHQDAHAHKNNGAQLEDQAKRKIDDQKNVDLDCLQAISRHDADVDERNGVVAPSSTADLSEKEEAVASFKLYILVTVLEDHRVTDFVTSYCNLAAERTKSMNLEAEIKRRERLNTNLLSLRSLVPRISGPDKASIIGDTIEYVKDLQKQVKQLEKISEVDEQEAPDNVVGVEMGTKADQIKTRTQEFDATQNKQTQQKEASHIQDAASGEF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2167 310 Gene3D - 191 262 IPR036638 GO:0046983
Acco01g2167 310 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 196 245 IPR011598 GO:0046983
Acco01g2167 310 SMART finulus 202 251 IPR011598 GO:0046983
Acco01g2167 310 MobiDBLite consensus disorder prediction 262 310 - -
Acco01g2167 310 Pfam Helix-loop-helix DNA-binding domain 202 246 IPR011598 GO:0046983
Acco01g2167 310 Coils Coil 242 262 - -
Acco01g2167 310 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 196 261 IPR036638 GO:0046983
Acco01g2167 310 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 93 293 - -
Acco01g2167 310 MobiDBLite consensus disorder prediction 277 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2167 Acco-ChrAcco01 37614009 37617701 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2167 1 93 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 35.246 2.26e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco01g2167 HLH 2.1e-06 No_clan