Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2165 ATGGATCCTTCACTTTGCGTTAGTGGTTGTGGCTTATTTGGTTCTTCTGAAACTAAGAACATGTGTTCAAAGTGTTACAAAGATCATATTCTCCAGCTCAATAAAAGTATCATTGAATCATTATCTCATTTGAAAATAAGCGAAGCCAAGAATATTACTGAGTTTGCTACGACAACAGGGATGAATAATATTACTGAACAAACTTCTATTTCTTCCATAGACGCTTTAGAATCTCAAAAGAAGAAGAATAGGTGCAACAGTTGCAACAAAAAAATCGGCTTAACTGGGTTCACATGCAAATGCGGAGATATGTTTTGTGGAAAGCATCGGTATCCAGAAGAACATTCCTGTGTTATGGATTTCAAACCGATTGGTCGTGAACTTCTTCGTAATCAAAATCCACTCTGTCAAGCTGACAAATTAGATTACAAACTTTAG 438 0.3584 MDPSLCVSGCGLFGSSETKNMCSKCYKDHILQLNKSIIESLSHLKISEAKNITEFATTTGMNNITEQTSISSIDALESQKKKNRCNSCNKKIGLTGFTCKCGDMFCGKHRYPEEHSCVMDFKPIGRELLRNQNPLCQADKLDYKL 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2165 145 ProSiteProfiles Zinc finger AN1-type profile. 79 125 IPR000058 GO:0008270
Acco01g2165 145 FunFam Zinc finger AN1-type containing 6 60 140 - -
Acco01g2165 145 Gene3D - 58 140 IPR035896 -
Acco01g2165 145 Pfam AN1-like Zinc finger 85 119 IPR000058 GO:0008270
Acco01g2165 145 SUPERFAMILY AN1-like Zinc finger 73 139 IPR035896 -
Acco01g2165 145 Pfam A20-like zinc finger 4 27 IPR002653 GO:0003677|GO:0008270
Acco01g2165 145 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Acco01g2165 145 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 36 - -
Acco01g2165 145 Gene3D - 1 53 - -
Acco01g2165 145 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Acco01g2165 145 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 142 - -
Acco01g2165 145 SMART AN1_Zf_4 85 122 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2165 Acco-ChrAcco01 37578503 37578940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2165 5 142 C2H2 Transcription Factor Family AT3G52800 37.662 1.90e-29 103