Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2154 ATGATTGTTAAGAGGAAAAACGTGTTGGTTGGGATTAAAATCGATAGTCCAAGCAGGCATCTTCTAAATTGGGCTCTTGTTAAAGTTGCTCAACCTGGAGATTGTGTTGTTGCAGTTCATGTGGTCAAATGTCCAGGTCATGTTTCGAAGAACAAGCCCCTTCTGGATGATTATTTAGAGGTTTATGATGGCCTATGTGACGTGAAAAAAATAAGTCTCGTAGGTCAAATCTTCATAGGGAGATGCGTTCGAAAAATTCTTGTGAGAGAGTCAAAGAACAATTCTGCTCTGGCTTTAGTGGTTGGTGGCGGTACTGCCACAGCTAAACATTGCGCCAAACGACTCTCACCCACCACAGATGTTGTGGCCATCCAGGATGGAAAAATTGTCTTCAGAAGGTGTACCAATCTTAAACTACCAGTACCAGGTCTTATACAAGATCCAAGGCCTAGTCTCACAAGCATGAACGACAAAGAAATCCTGTCTATATATGCAGACTCCGAGGTTGGAACCGTGAAATCAATATGTTGTGAGGAGACAAGAGAAGATGTCCCAGAATTGAAACAAGTATCTGACGAAATTGAAGGGAGCAAAAAAGTTTGTTCAAGAGCAATATCTCTGTTTGTAGTTGACCCTGGTGAGCAGAAACTAGGATGGCCCTTGCTCCGGAGAGTTAATTCAGAGATATCAGAGCCAGAGACACCTCTTGCAAGGAACTTGTCTGTAGTACAATGGGTAATGAACTTACCAGATCGTTCTCCAGAGAAAAGTTCTTGCTTTTCATCCACAGAAGAAAGTCCCTCAGAAAGAGGCATAAGTGATTTTGAGGATGATAGACAGAAAAACAGTTCATGTTCTTCATCTTTTGAGCTACCAAAGGAATTGGAGGGGATTTTGCACTTGAATTTATTTGATTGCAAGTGGTTTAACTATGAGGATCTCAAGTCCTGGACTTCTCAATTCTCTTCAGGAAATCTGATAGGGAAAGGAGGGAGTAACTGTGTGTACAAAGGGATTCTCCCTGATGGAAAACCAATTGCAGTCAAAGTTTTACAATCATCAAAAGTGGCTTGTAAAGATTTTGCACGGGAAGTGGAAATAATATCCTCTTTGAAGCATAAATACATAACCCCTTTGCTTGGAATTTGCATCTCAGAAAATGCTTTAATCTCTGTCTATGAGTTTTTCCCCAAGGGAAGCTTGGAGGAAAACTTACACGGTGAGAACAAGGATGGGTCCATATTGTCATGGCAAGTGAGATTTAATATGGCTGTTGGTATAGCAGAAGCCCTCAATTACCTTCATAACGAAACTTCAAAGCCTGTCATACACAGAGATGTCAAGTCTTCAAATATTCTTCTCTCCCATGGCTTTGAACCACAATTGACTGATTTTGGACTCGCAATTTGGGGACCAGCAAGTTCATATTTTCTGACACAAGATATAGTAGGAACATTCGGATATCTTGCTCCTGAATACTTCATGTATGGAAAAATAAGTGACAAGATAGATGTGTACGCCTTTGGTGTAGTTCTTCTTGAACTAATCTCAGGAAGGGAACCAATCAGTTCCGAGATTTGCAAAGGAAAACAAAGTTTGGTCGCGTGGGCAAAACCAATAATAGAGAGTGGGAATGTTAAAGGCTTAATGGACTCCAATTTAGAAGGGAATTTTGATGAGGTCCAAATGCAAAGAATGGTTAAGGCAGCAAAGCTATGCATTACAAGGGCTGCTAGGCTTCGTCCCAACATTAACCAGATACTGAAGATCCTGCAAGGAGAAGAAAGAGATGAGAGTTTTATGAGCTCATCTCTTGGGTTTGATGATAATAATGAGAATACAGAAAACCAGGAGAACATAGACGACGAAGTGTATCCAAATTCAAGTGCAGAGTTACACCTAAGTCTGGCATTACTTGATGTTGTTGATGACTACTCCACACCGCATAGCAGTAGTACAGAGCGGAGCAACAGTCTTTCTTTGGAAGAACACTTGAAAGAAAGATGGAGCAGATCATCCAGTTTTGATTAG 2031 0.4087 MIVKRKNVLVGIKIDSPSRHLLNWALVKVAQPGDCVVAVHVVKCPGHVSKNKPLLDDYLEVYDGLCDVKKISLVGQIFIGRCVRKILVRESKNNSALALVVGGGTATAKHCAKRLSPTTDVVAIQDGKIVFRRCTNLKLPVPGLIQDPRPSLTSMNDKEILSIYADSEVGTVKSICCEETREDVPELKQVSDEIEGSKKVCSRAISLFVVDPGEQKLGWPLLRRVNSEISEPETPLARNLSVVQWVMNLPDRSPEKSSCFSSTEESPSERGISDFEDDRQKNSSCSSSFELPKELEGILHLNLFDCKWFNYEDLKSWTSQFSSGNLIGKGGSNCVYKGILPDGKPIAVKVLQSSKVACKDFAREVEIISSLKHKYITPLLGICISENALISVYEFFPKGSLEENLHGENKDGSILSWQVRFNMAVGIAEALNYLHNETSKPVIHRDVKSSNILLSHGFEPQLTDFGLAIWGPASSYFLTQDIVGTFGYLAPEYFMYGKISDKIDVYAFGVVLLELISGREPISSEICKGKQSLVAWAKPIIESGNVKGLMDSNLEGNFDEVQMQRMVKAAKLCITRAARLRPNINQILKILQGEERDESFMSSSLGFDDNNENTENQENIDDEVYPNSSAELHLSLALLDVVDDYSTPHSSSTERSNSLSLEEHLKERWSRSSSFD 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2154 676 Gene3D Transferase(Phosphotransferase) domain 1 396 604 - -
Acco01g2154 676 MobiDBLite consensus disorder prediction 254 268 - -
Acco01g2154 676 Pfam Protein kinase domain 323 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2154 676 MobiDBLite consensus disorder prediction 645 676 - -
Acco01g2154 676 ProSiteProfiles Protein kinase domain profile. 321 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2154 676 SUPERFAMILY Protein kinase-like (PK-like) 303 591 IPR011009 -
Acco01g2154 676 FunFam Putative receptor-like serine/threonine-protein kinase 396 605 - -
Acco01g2154 676 MobiDBLite consensus disorder prediction 252 281 - -
Acco01g2154 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Acco01g2154 676 Gene3D Phosphorylase Kinase; domain 1 292 395 - -
Acco01g2154 676 SMART serkin_6 321 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2154 676 CDD USP_Like 7 102 - -
Acco01g2154 676 MobiDBLite consensus disorder prediction 659 676 - -
Acco01g2154 676 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 290 395 - -
Acco01g2154 676 PANTHER OS08G0249100 PROTEIN 204 619 IPR046958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2154 Acco-ChrAcco01 37476131 37479211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2154 309 594 Trihelix Transcription Factor Family AT1G70460 42.612 7.35e-74 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Acco01g2154 Pkinase 8.8e-42 CL0016