Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2137 ATGTCGAGCATCGCCAATGACATCCTGCTGGCGAGCCCGATACAGATGGCGGACCAGGTGGTCAAGCTGGCGGACGAAGCCCAAGCCTCCAAGTTAGAATGTTTGGAGCTCAAGGCCAAAACAGAGAAACTCGTGGCCTTGCTCCGGCAAGCCGCCCGGGCCAACCTCTACGAGAGGCCAACACGGCGAATCATCGACGACGTCGAACAAGTCCTCGAGAAGGCCCTCCAACTCGTCGAAAAATGCTGCGGAAACGGCCTTATGAAACGACTCTTCACCATCATAACCCCGGCGGCGTTTCGCAAGACGTCCACACAGCTCGATAATTCCCTCGGCGACGTACAATGGCTCCTCCGTGTATCTGTCCCCGCCGACCAACGCGACGACGATTATCTGGGTGGTTTGCCCCCAATCGCCTCCAACGAGCCCATCTTGTGCCTAATTTGGGAGCAGATAGCCATATTGCTCACAGGCTCTTCCATGGAAGATCGCTCTGACGCCGCTGCTTCCTTGGTCTCTCTGGCTCGAGACAATGACAGGTACAACAAATTGATTATTGAGGAGGGTGGAGTTCCGCCACTATTGAAATTGCTGAAGGAAGGGCATGTAGAGGGTCAGGAAAGTGCAGCGAGAGCGATTGGGTTACTTGGGAATGACCCAGAAAGCGTGGAACACATTGTGAATGCTGGGGTTTGCACAGTGTTTGCCAAAGTTCTCAAAGAAGGTGACATGAAGGTTCAGGCTATGGTGGCTTGGGCTATCTCTGAATTAGCATATCACCACCCAAAGTGTCAGGATCACTTTGCTCAGACAAATTGCATACGCCTGCTGGTAAGGCATCTTGCCTTTGAGACAATCCAAGAGCACAGTAAGTACGCCATTACCAGTAAGCAAAACATGTCGTCCATCCACTCCGTCGTGATGGCCAGTAACGCTCAGAACCAGGATCATCATGACAAGAAGAATATGATGATGCATGAAGGTAACTATCATTACGTTCCTCGTCCTATGGGGAACCAATCAACCAGCCAAATGAGTAATGTAGTCACCAACACAATGGCTGTGAAAGACAGCCACGGAGGCAATAACTCCTCCAAGCATGTTTCGATTGCGGTGACGAGTCTGAAGGGGAGGGAGGCTGTGGATCCAGTTACAAAGGCCCAAATGAAGGCCATGGCAGCGAAAGCGCTGTGGCAACTCTCGAGGGGAAACGTTACTGTGTGTCACCGCATCACAGAATCAAAGGCTCTGTTATGTTTTGCTGTTCTGTTGGAGAAGGGACCTGATGATGTCAAATCCTTTTCAGCTTTTGCTTTAATGGAGATCACAGCGGTGGCAGAGAAACACGCAGAGTTGAGACGCTCTGCTTTCAAACCCAATTCCCCTGCTGCAAAAGCCGTGGTGGACCAGTTTGTTAGGATCATTTCAAAAATGGAATTTGATCTTCTCATACCTTGCATCAAATCAATTGGTAACTTGTCAAGGACTTTTAGAGCAACAGAAACAAGAATTATACCACCATTGGTGGCTTTGCTTGAAGAAGGAGTAGACGAAGATGTTAGAGTGGAATCCGCAATTGCACTTGTCAAGTTTGCTTGTCCTGATAACTTTCTGCACCAGACTCACTGCTCAGCCATAATAGAAGCAGGAGGAGTACCTCACATAATTACCATTCTTAACTTTCTGGGGCATACTGGAAGGGTTGCTGCGGCCCAGCTTCTGTGTTATGTGGTAATACATGTTCCCAAAAGTGAGACGCTTACCCAAGATGATACAGTTCTCAATGTTCTGAAATGGTGCAAAGAGACTGAAAACCTCCAGCTTAAGCCAATTGTTGGAGAGCTTTTAGAAGAAGCCATGGGTATATTGACACTGTATCGAACAAATGACGCTGCGAGAGGATCCCACAGTTATTGA 1917 0.4893 MSSIANDILLASPIQMADQVVKLADEAQASKLECLELKAKTEKLVALLRQAARANLYERPTRRIIDDVEQVLEKALQLVEKCCGNGLMKRLFTIITPAAFRKTSTQLDNSLGDVQWLLRVSVPADQRDDDYLGGLPPIASNEPILCLIWEQIAILLTGSSMEDRSDAAASLVSLARDNDRYNKLIIEEGGVPPLLKLLKEGHVEGQESAARAIGLLGNDPESVEHIVNAGVCTVFAKVLKEGDMKVQAMVAWAISELAYHHPKCQDHFAQTNCIRLLVRHLAFETIQEHSKYAITSKQNMSSIHSVVMASNAQNQDHHDKKNMMMHEGNYHYVPRPMGNQSTSQMSNVVTNTMAVKDSHGGNNSSKHVSIAVTSLKGREAVDPVTKAQMKAMAAKALWQLSRGNVTVCHRITESKALLCFAVLLEKGPDDVKSFSAFALMEITAVAEKHAELRRSAFKPNSPAAKAVVDQFVRIISKMEFDLLIPCIKSIGNLSRTFRATETRIIPPLVALLEEGVDEDVRVESAIALVKFACPDNFLHQTHCSAIIEAGGVPHIITILNFLGHTGRVAAAQLLCYVVIHVPKSETLTQDDTVLNVLKWCKETENLQLKPIVGELLEEAMGILTLYRTNDAARGSHSY 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2137 638 Pfam Armadillo/beta-catenin-like repeat 184 214 IPR000225 GO:0005515
Acco01g2137 638 Gene3D - 8 120 IPR036537 GO:0007166
Acco01g2137 638 Gene3D - 364 625 IPR011989 -
Acco01g2137 638 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 189 231 IPR000225 GO:0005515
Acco01g2137 638 SUPERFAMILY ARM repeat 150 603 IPR016024 -
Acco01g2137 638 Gene3D - 150 326 IPR011989 -
Acco01g2137 638 PANTHER ARMADILLO REPEAT ONLY 4 9 628 - -
Acco01g2137 638 CDD MLKL_NTD 14 92 - -
Acco01g2137 638 SMART arm_5 177 218 IPR000225 GO:0005515
Acco01g2137 638 SMART arm_5 492 533 IPR000225 GO:0005515
Acco01g2137 638 SMART arm_5 539 579 IPR000225 GO:0005515
Acco01g2137 638 SMART arm_5 219 259 IPR000225 GO:0005515
Acco01g2137 638 FunFam Armadillo repeat only 2 150 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2137 Acco-ChrAcco01 37275726 37277781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2137 152 278 U-box Gene Family AT2G28830 33.582 3.95e-06 48.1