Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2130 ATGGTCACTTCAGAACTTAACCACGATGCACGCGCCCCTCTATATAACTATACTTCCCAAGCCTTACACCCCACCTTGTCCTCTTCTCCTCATTTGATCAGTGTGAATCTATTTTCTTCTCTAGCAACAATGGCAAACCCTAAGGTCTTTTTCGATATGGCCGTCGGCGGTCAACCTGCTGGCCGAATCGTCATGGAGCTTTTCGCCAATACCACCCCCAGGACCGCGGAGAATTTCCGTGCCCTTTGCACCGGCGAGAAGGGAGTCGGTCGCAGCGGCAAGCCACTTCACTACAAGGGCTCCACCTTCCACCGTGTGATCCCCGATTTCATGTGCCAGGGAGGTGATTTCACCGCTGGAAATGGCACCGGTGGCGAGTCGATTTATGGCGCCAAGTTCGCCGACGAGAACTTCGTCAAGAAGCACACCGGTCCTGGTATCCTTTCCATGGCGAATGCTGGCCCTGGAACCAACGGATCTCAGTTCTTCATTTGCACGGCCAAGACTGAGTGGCTTGACGGCAAGCACGTGGTGTTCGGCCAAGTCGTGGAGGGCTTGGATGTGGTTAGGGAGATCGAGAAGGTTGGGTCTAGATCTGGCAAGACCTCCAAGCCAGTGGTGATTGCTAACTGCGGGCAACTTTAG 645 0.5426 MVTSELNHDARAPLYNYTSQALHPTLSSSPHLISVNLFSSLATMANPKVFFDMAVGGQPAGRIVMELFANTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGAKFADENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLDGKHVVFGQVVEGLDVVREIEKVGSRSGKTSKPVVIANCGQL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2130 214 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 50 213 IPR002130 GO:0000413|GO:0003755
Acco01g2130 214 PIRSF Peptidylpro_ismrse 35 214 IPR024936 GO:0003755
Acco01g2130 214 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 51 212 IPR002130 GO:0000413|GO:0003755
Acco01g2130 214 Gene3D - 37 214 IPR029000 -
Acco01g2130 214 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 67 82 IPR002130 GO:0000413|GO:0003755
Acco01g2130 214 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 146 161 IPR002130 GO:0000413|GO:0003755
Acco01g2130 214 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 174 189 IPR002130 GO:0000413|GO:0003755
Acco01g2130 214 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 103 115 IPR002130 GO:0000413|GO:0003755
Acco01g2130 214 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 161 173 IPR002130 GO:0000413|GO:0003755
Acco01g2130 214 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 48 214 - -
Acco01g2130 214 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 98 115 IPR020892 GO:0003755|GO:0006457
Acco01g2130 214 CDD cyclophilin_ABH_like 47 212 - -
Acco01g2130 214 FunFam Peptidyl-prolyl cis-trans isomerase 43 214 - -
Acco01g2130 214 SUPERFAMILY Cyclophilin-like 37 214 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2130 Acco-ChrAcco01 37206610 37207319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2130 17 195 U-box Gene Family AT5G67530 41.622 1.37e-28 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g2130 01 37206610 37207319 Acco01g2130 01 37206610 37207319 ECH