Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2091 ATGAAGTTCCTCAAATTCTCTCACCTCACTTTGTTCATCTTCTTCCTCGTTATGTTGCCGGATCCTGGAACCGCTCATGATTACAGAGAAGCATTGTCGAAAGCGATCTTGTTCTTTGAGGGCCAGCGATCGGGGTACCTTCCTGACGACCAGAGAATGAAATGGAGAGGACATTCAGGGCTGAGCGACGGCTGGGATTACAACACTGACCTCACCGGCGGCTACTACGACGCCGGCGACAACGTCAAGTTCGGGTTCCCGATGGCGTTCACGGCCACAATGCTGGCTTGGAGCGTCGTCGAATTCGGAGATGAGATGCCTCGTCAGGAGCTTCGGAATTGCCTCGTCGCTATTCGCTGGGCCACCGATTATCTGCTCAAGACTGTATCTCAGCCCGATCGGATTTTTGTTCAGGTGGGGGATCCGAGCTCAGACCACAACTGTTGGGAGAGGCCAGAGGACATGGACACAGACAGGACGGTTTACGCCGTTGATGCGCCGAATCCAGCTTCCGACATTGCCGGCGAAACAGCGGCGGCGCTGGCTGCTTCTTCCATGGCGTTCCGGTCTTCGGACCCCGGATATTCCGATACACTGCTCCGAAATGCGATCAAGGCATTTCAGTATGCTGATAACTACAGAGGTGCTTACACGGACAATGATCATGTCAGGGAAGGTGCTTGCCCTTATTACTGCAACTTTGGAGGCTACCAGGACGAGCTGTTATGGGGAGCAGCATGGCTAAGGAGGGCAACAGGAGACGATGATTTCTTAAACTACCTTCAATACAATGCCAAAGGTTTCGGTGCTGAAGAGAACATCAATGAGTTTGGCTGGGAAAACAAGCATGCTGGTCTCAAAGTTCTTGCCTCCAAGGAAGCAGTAGAAGGAAGCATGGACTCTCTACAATCCTTTAGGGAGTCAGCAGAGAGCTTCATATGCACACTGGTACCTCAATCACCAGCCTCACATATCCAATACACTCCTGGAGGCCTCATTTACAGACCTGGAGGCAGCAATTTACAGCATTCAACTTCTCTCTCCTTCCTTCAACTCGTGTACGCCAACTATCTCTCTCGCTCCTCCCAAACCCTAAATTGTGGGACCCTCTCCGACATCACTCCGGCCACTCTCCGTCGCATTGCCAAGAGACAAGTTGACTACATCCTCGGCGATAACCCCATGGGACTGTCCTACATGGTCGGATACGGCGACCACTACCCTCGGAGGATCCACCACCGTGGCTCTTCTCTTCCTTCTATCAAGGACCACCCTCGGTTCATCGCTTGCAAGGAAGGCACTGTCTATTTCAATTCTTCCAACCCTAACCCTAATCTTCTTGTCGGGGCTCTTGTCGGAGGGCCTGAGGAAGATGATGAGTACGAGGATGATCGAGCTAATTTCAGAAAGTCTGAGCCAACTACCTATATCAATGCTCCTTTTGTTGGAGTTTTAGCGTACTTTGCTGCTCATCCTGACCCTTGA 1485 0.5172 MKFLKFSHLTLFIFFLVMLPDPGTAHDYREALSKAILFFEGQRSGYLPDDQRMKWRGHSGLSDGWDYNTDLTGGYYDAGDNVKFGFPMAFTATMLAWSVVEFGDEMPRQELRNCLVAIRWATDYLLKTVSQPDRIFVQVGDPSSDHNCWERPEDMDTDRTVYAVDAPNPASDIAGETAAALAASSMAFRSSDPGYSDTLLRNAIKAFQYADNYRGAYTDNDHVREGACPYYCNFGGYQDELLWGAAWLRRATGDDDFLNYLQYNAKGFGAEENINEFGWENKHAGLKVLASKEAVEGSMDSLQSFRESAESFICTLVPQSPASHIQYTPGGLIYRPGGSNLQHSTSLSFLQLVYANYLSRSSQTLNCGTLSDITPATLRRIAKRQVDYILGDNPMGLSYMVGYGDHYPRRIHHRGSSLPSIKDHPRFIACKEGTVYFNSSNPNPNLLVGALVGGPEEDDEYEDDRANFRKSEPTTYINAPFVGVLAYFAAHPDP 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2091 494 Pfam Glycosyl hydrolase family 9 28 485 IPR001701 GO:0004553|GO:0005975
Acco01g2091 494 FunFam Endoglucanase 24 492 - -
Acco01g2091 494 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 388 414 IPR018221 -
Acco01g2091 494 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 461 479 IPR033126 -
Acco01g2091 494 SUPERFAMILY Six-hairpin glycosidases 14 490 IPR008928 GO:0005975
Acco01g2091 494 PANTHER ENDO-1,4-BETA-GLUCANASE 19 489 - -
Acco01g2091 494 Gene3D - 24 493 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2091 Acco-ChrAcco01 36791393 36795434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2091 9 493 Glycoside Hydrolase AT4G39000 59.053 0.0 588