Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2075 ATGTTGAGAGAGACGATAAGAGAAGGAAAAGGAAGAGAAGTGACCAAATGCCAAGACTGTGGGAACCAAGCAAAGAAGGGCTGTGAATTCACGAGATGCAGAAGTTGCTGTAACAATAAAGGCTTTCGCTGCCAAACTCATATCAACAGTACTTGGGCTCCTAACTCTAGGAGACGCCACCTTCGCCCTCAACCCCTCACTCACTCTAATAATCCATCTCCAGGAAAAGAGGAACTGAATAAGCTGCCGGCTGCAATGAGTTCGGCGGCGGTGTTCCGGTGCGTTCGGGTGCGTTCGGAGGATGATACGGTGGACGAATATGCATATCAAACGTCTGTGAATATTGGAGGACGCGTGTTTAGTGGTGTTCTTTATGATCAAGGCCCTGAAAGCTTATTCTCCTATAATAATTACAACGTTGGTGGTCAAACTTCGTCCAAAGCCCCTTTGAATCTGATTCATCATCAGCATGGTGACCATTTCATGGACACTTCAATGATTCAATCCCATGATGTTGCTGATGCTTCCACTTCTACTGTGCCTCCATTAATGACCTCACAGCTGGCCTCTTCTGCTGAGCAATTTTCTTCTTCGTCGTCGTATCCTCTTTCACTTGGAACCTTTAGGCCTCCTGTATCATATTTCACTCAACCAAAGACTTAA 663 0.4585 MLRETIREGKGREVTKCQDCGNQAKKGCEFTRCRSCCNNKGFRCQTHINSTWAPNSRRRHLRPQPLTHSNNPSPGKEELNKLPAAMSSAAVFRCVRVRSEDDTVDEYAYQTSVNIGGRVFSGVLYDQGPESLFSYNNYNVGGQTSSKAPLNLIHHQHGDHFMDTSMIQSHDVADASTSTVPPLMTSQLASSAEQFSSSSSYPLSLGTFRPPVSYFTQPKT 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2075 220 MobiDBLite consensus disorder prediction 53 79 - -
Acco01g2075 220 NCBIfam putative zinc finger domain, LRP1 type 16 58 IPR006510 -
Acco01g2075 220 Pfam Domain of unknown function (DUF702) 76 130 - -
Acco01g2075 220 Pfam Domain of unknown function (DUF702) 15 63 - -
Acco01g2075 220 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 9 185 IPR007818 GO:0003700|GO:0006355
Acco01g2075 220 NCBIfam LRP1 C-terminal domain 82 129 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2075 Acco-ChrAcco01 36575126 36575884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2075 16 139 C2H2 Transcription Factor Family AT2G21400 47.183 3.29e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Acco01g2075 DUF702 2.7e-19 No_clan