Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2061 ATGGCTTCTTCAAGCGGAACATCTTCAGGTTCAGGTTCAGGGTCATCGTCTCTGCTTCAAAACTCTGGTTCAGAGGGGGATTTGCAGGTTCTGATGGATCAGAGGAAGAGGAAGAGGATGATATCAAATCGTGAGTCAGCAAGGCGATCTCGTATGAGAAAGCAGAAGCATCTGGACGATCTGGTGGCTCAAGTGGCTCAGCTGAGAAAAGAGAATCAGCAGATTCTCACAAGCGTTAATCTCACCACAGAGCAGTACTTAAGTGTTGAATCTGAGAACTCTGTTCTTCGAGCTCAAGCCAGTGAGCTGAGCCACCGGCTGGATTCTCTGAACGAAATAATCGATAACTTGAACTTGAATGCCAGCAACAATGGAGCTTTCGCTGCGAACACCTTCATTGAGCCCAACAATGGCTTCTTCAATCCAATGAACATGGGATATCTGAACCATCCGATCATGGCTTCTGCAGATTTATGGCCCTAA 483 0.4679 MASSSGTSSGSGSGSSSLLQNSGSEGDLQVLMDQRKRKRMISNRESARRSRMRKQKHLDDLVAQVAQLRKENQQILTSVNLTTEQYLSVESENSVLRAQASELSHRLDSLNEIIDNLNLNASNNGAFAANTFIEPNNGFFNPMNMGYLNHPIMASADLWP 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2061 160 CDD bZIP_plant_GBF1 36 86 IPR045314 GO:0003700|GO:0006355
Acco01g2061 160 Pfam bZIP transcription factor 35 93 IPR004827 GO:0003700|GO:0006355
Acco01g2061 160 Coils Coil 100 120 - -
Acco01g2061 160 FunFam Basic region/leucine zipper protein 33 115 - -
Acco01g2061 160 Coils Coil 51 78 - -
Acco01g2061 160 Gene3D - 33 87 - -
Acco01g2061 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 38 53 IPR004827 GO:0003700|GO:0006355
Acco01g2061 160 PANTHER BZIP TRANSCRIPTION FACTOR 44 5 156 - -
Acco01g2061 160 SUPERFAMILY Leucine zipper domain 35 87 IPR046347 GO:0003700|GO:0006355
Acco01g2061 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 33 96 IPR004827 GO:0003700|GO:0006355
Acco01g2061 160 MobiDBLite consensus disorder prediction 1 55 - -
Acco01g2061 160 MobiDBLite consensus disorder prediction 1 28 - -
Acco01g2061 160 SMART brlzneu 31 95 IPR004827 GO:0003700|GO:0006355
Acco01g2061 160 MobiDBLite consensus disorder prediction 30 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2061 Acco-ChrAcco01 36452116 36452598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2061 31 157 bZIP Transcription Factor Family AT4G34590 60.150 5.68e-46 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco01g2061 bZIP_1 4e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g2061 01 36452116 36452598 Acco01g2061 01 36452116 36452598 ECH