Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2027 ATGGCTTCAAGCTCTCAGAGCAAAAAGAGGGACTGTGATTCCTCATCATGGACACCTAAACAGAACAAGAGGTTTGAGAAGGCTCTTGCAAAATACGACAAGGACACTCCTGATCGATGGCAGAATGTGGCTAAAGAGGTTGAAGGAAAATCAGCTGAGGAAGTTAAGACACACTATGAAATCCTCTTAGAGGATCTAAGACACATTGAGTCTGGTCATGTTCCCATCCCAAACTACAAATCCAGTACTGGTACCACCGCCAATGATGTTGTTGAAAAAGATAGGCTTATGAAGTATCGTCAGCTGAATTGA 312 0.4295 MASSSQSKKRDCDSSSWTPKQNKRFEKALAKYDKDTPDRWQNVAKEVEGKSAEEVKTHYEILLEDLRHIESGHVPIPNYKSSTGTTANDVVEKDRLMKYRQLN 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2027 103 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 88 IPR044636 GO:0003700
Acco01g2027 103 ProSiteProfiles Myb-like domain profile. 9 63 IPR001005 -
Acco01g2027 103 MobiDBLite consensus disorder prediction 1 22 - -
Acco01g2027 103 SUPERFAMILY Homeodomain-like 15 71 IPR009057 -
Acco01g2027 103 SMART sant 13 65 IPR001005 -
Acco01g2027 103 Pfam Myb-like DNA-binding domain 15 59 IPR001005 -
Acco01g2027 103 CDD SANT 16 63 IPR001005 -
Acco01g2027 103 Gene3D - 8 76 - -
Acco01g2027 103 ProSiteProfiles SANT domain profile. 14 67 IPR017884 -
Acco01g2027 103 FunFam Transcription factor SRM1 9 76 - -
Acco01g2027 103 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2027 Acco-ChrAcco01 36128508 36129073 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco01g2027 Myb_DNA-binding 2.7e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g2027 01 36128508 36129073 Acco01g2027 01 36128508 36129073 ECH
Acco01g2027 01 36128508 36129073 Acco12g2092 12 32492335 32493057 ECH
Acco01g2027 01 36128508 36129073 Acco11g2296 11 36508499 36509357 ECH