Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2021 ATGATTCTCATTCATTTACAAGGCTTAGCTGGACTGGGCGGGATAACCGGAGGTCAAACCCACCTTAGAACCCAACCGGAGCCGGATTCACAACAAACTAGACGAAGCCCAGAAAGCGATGCCGGCCATTTGTGTTTTCGTCATGGGAGCTTTGAAGAATCAAAGTTTCTGATTGAGGAAGATGGGAATGCTTGGATCTTCCGGTCATCATCACTCATAAGAGACATGGTGGATCGGCGAAGAAGCCTAGTGTCTCTCGGGTGCTTCTTCTTCTCGTTGCTGTTTCAGTTCACATTTGAGCAGATTACGCCTCTGAGTTCAAACATTGAGCTAGCTGCTCTCTTTGACCTTAGATCGTCGCTGGGGCTGAGGAGCAGGGAATGGCCAAGAAAAGTCGACCCTTGCTCTTCCTGGAAGGGGGTCACATGTGAGAATGGTCGAGTCATTGGGATCAATATTTCTGGGTTTAGAAGAACCCGTCTTGGGAGGCTAAACCCACAATTTTCAGTCCAAGGCTTAGCCAATATTACTCTCTTGCAATCTTTCAATGCCTCCAATTTTCTGCTTCCTGGTTCTATTCCTGACTGGTTTGGCCTGCAGCTCTCATCTCTGAAGGTGCTTGATCTTCGGTCTTGCTCTGTAAATGGTGCTATTCCTTCCAGTATTGGGAATTTAACTAACATCACTAGTCTGTATTTATCTGATAATAATCTTACTGGGATAATCCCTGATAGTCTGGGTCAACTGCTAAGCCTTTCAGTTGTTAACTTATCGAGAAATTCTCTTTCCGGAACCATTCCAACGTCGTTTGTCTCTCTTGGGAATCTTTCCTCTCTTGACATTTCCAACAATTTTTTGTCTGGCTCGATTCCTCCTGGCATTGGGGCCATCACAAGGTTACAATACTTGAATCTCTCTGGTAACAGTTTAATGGCTTCTATACCATCTCAGCTGGGAAATTTAAGCAGCTTGGTTGACCTTGATCTTAGTTTTAATCATTTGACTGGTGGCGTGCCTCCGGAATTAAGAGGGCTGAGGAGCTTGCAGAGAATGATACTAAGTAACAACATGCTTGATGAACTTTTGTCCGAGAACTTGTTTCCTGCTTTGTCACAATTGCAGGTTGTTGTGCTGAGACAAAACAATTTCACTGGTGATCTGCCTGATGCACTGTGGTCTCTGCCAAGATTGAGCTATCTCGACCTTTCTGATAACAATTTCACTGGTATACTTCCAAATTCTAGTTCCAATCAGAGTGTGACTGCTGCTATGCTTAATATTTCTAATAATATGTTTTATGGAAGCCTAAGTCCTGTTATCAGAAGGTTCAGTGTCAATGATCTGTCAAGCAATTATTTTGAGGGCAAGATTCTAGATTCCATGCTTAATATATCTCTAAATACCAACTGCCTCCAAAATGTTTCGAATCAGAGGACAGCTGGGGAATGTGCGTCATTTTATGCTGAGAGGGGCCTCACTTTTGATAATTTTGGACGCCCGAATTCAACAGGACCTCCTGCGCCTGAAAGCTCTCGGAAGAGCAATAGGGATAAGATTATATTGGCTGCAGTCTTGGGTGGATTTGGTTTGCTTGTTATTATGTTGTTGCTATTGGTCTTGTTCCTTCTTTGTGTTCGTAAGAGGCGTAATTCAAGTCAAAGAGGAAATGGTGTGGGCCCTGCTCCTGCTGGGAGTAGCCCTCCACCTCCTGGCATGTCAATCAATTTCATAAATGTGGGAGATTCATTTACAATACAGCAGCTGCTTCAGGCTACTGGTGATTTCAGTGATGCAAATCTCATCAAACATGGGCACTCTGGGGATCTCTTCAACGGTGTTTTGGAAAGTGGTGTACCTGTAGTCATTAAAAAGATTGATGTGCGTACAACTAAGAAAGATTCTTACCTAGTGGAATTGGACCTTTTCAGTAAGATTTCTCATACTAGATTTGTCCCTTTGCTGGGCCATTGCCTAGATAATGAGAATGAGAAGTTCCTTGTTTATAAACATATGCCAAATGGAGACTTGGCAAATAGTCTGTATTACAAAAAATCTACATCTGAAGATGGTACTTTGCAGTCATTGGACTGGATAACAAGGTTGAAAATTGCTATTGGAGCGGCGGAAGCCCTAACTTATCTGCATCATGAGTGTAATCCACCCTTTGTTCATAGAGATATTCAAGCAAGCAGTATACTTTTAGATGATAAATATGAAGTTCGGTTAGGTAGTCTAAGTGAAGTCTGCATCCAAGAAGGGGATAGTCATCAGAGCAAAATTACTAGGCTGCTAAGGCTACCCCAGTCCTCTGATCCAGGCACATCTGGTTCATCTACATCAAACTGTGCCCATGATGTTTATTGCTTTGGTAAAATATTGCTTGAATTGGTGACTGGGAAGATTGGAATCAGTGCGTCCAGTGATACTGAATTCAAGGAATGGTTGGATCAGATGTTACCATTCATTAGTATTTATGAGAAGGAGCTTGTAGCGAAAATTGTAGATCCATCTCTGGTTGTAGATGAGGATTTCTTAGAGGAGGTGTGGGCTATTGCCATTGTTGCAAGATCTTGCCTAAATCCTAAACCTTCAAGACGACCACCCATGCGATACGTTCTCAAGGCTCTAGAAAACCCCTTTAAAGTTGTGAGGGAAGAAAGTGCCAGTTCTTCTCGGCTTAGAGCAACCTCTTCAAGGGGCTCTTGGAATGCTGTTTTGTTTGGTAGTTGGCGTCAGAGTTCTGACGTAACAGCAATCCCGGCAGCTTCTGGTTCCAAAGTAGAAGGAGGAAGTAGTTTAAAGCATTCAGGAACAACCGGCTCACAGGGTAGTGGCAACAACGGAGGTGGTTCATCATCCCGGAGGCGACATTCAAACGAAATATTCCCAGAGCCATCTAACGTACAGGACATAGAAAGGCCAGAACAGCAGGAATAG 2937 0.4341 MILIHLQGLAGLGGITGGQTHLRTQPEPDSQQTRRSPESDAGHLCFRHGSFEESKFLIEEDGNAWIFRSSSLIRDMVDRRRSLVSLGCFFFSLLFQFTFEQITPLSSNIELAALFDLRSSLGLRSREWPRKVDPCSSWKGVTCENGRVIGINISGFRRTRLGRLNPQFSVQGLANITLLQSFNASNFLLPGSIPDWFGLQLSSLKVLDLRSCSVNGAIPSSIGNLTNITSLYLSDNNLTGIIPDSLGQLLSLSVVNLSRNSLSGTIPTSFVSLGNLSSLDISNNFLSGSIPPGIGAITRLQYLNLSGNSLMASIPSQLGNLSSLVDLDLSFNHLTGGVPPELRGLRSLQRMILSNNMLDELLSENLFPALSQLQVVVLRQNNFTGDLPDALWSLPRLSYLDLSDNNFTGILPNSSSNQSVTAAMLNISNNMFYGSLSPVIRRFSVNDLSSNYFEGKILDSMLNISLNTNCLQNVSNQRTAGECASFYAERGLTFDNFGRPNSTGPPAPESSRKSNRDKIILAAVLGGFGLLVIMLLLLVLFLLCVRKRRNSSQRGNGVGPAPAGSSPPPPGMSINFINVGDSFTIQQLLQATGDFSDANLIKHGHSGDLFNGVLESGVPVVIKKIDVRTTKKDSYLVELDLFSKISHTRFVPLLGHCLDNENEKFLVYKHMPNGDLANSLYYKKSTSEDGTLQSLDWITRLKIAIGAAEALTYLHHECNPPFVHRDIQASSILLDDKYEVRLGSLSEVCIQEGDSHQSKITRLLRLPQSSDPGTSGSSTSNCAHDVYCFGKILLELVTGKIGISASSDTEFKEWLDQMLPFISIYEKELVAKIVDPSLVVDEDFLEEVWAIAIVARSCLNPKPSRRPPMRYVLKALENPFKVVREESASSSRLRATSSRGSWNAVLFGSWRQSSDVTAIPAASGSKVEGGSSLKHSGTTGSQGSGNNGGGSSSRRRHSNEIFPEPSNVQDIERPEQQE 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2021 978 FunFam Predicted protein 565 670 - -
Acco01g2021 978 Gene3D Transferase(Phosphotransferase) domain 1 671 896 - -
Acco01g2021 978 Pfam Leucine rich repeat 251 310 IPR001611 GO:0005515
Acco01g2021 978 Pfam Leucine rich repeat 363 407 IPR001611 GO:0005515
Acco01g2021 978 FunFam Putative LRR receptor-like serine/threonine-protein kinase 671 896 - -
Acco01g2021 978 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 107 266 - -
Acco01g2021 978 Pfam Protein tyrosine and serine/threonine kinase 601 817 IPR001245 GO:0004672|GO:0006468
Acco01g2021 978 FunFam Leucine-rich repeat receptor protein kinase EMS1 267 365 - -
Acco01g2021 978 ProSiteProfiles Protein kinase domain profile. 595 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2021 978 MobiDBLite consensus disorder prediction 17 40 - -
Acco01g2021 978 MobiDBLite consensus disorder prediction 929 978 - -
Acco01g2021 978 Gene3D Ribonuclease Inhibitor 365 486 IPR032675 -
Acco01g2021 978 SUPERFAMILY Protein kinase-like (PK-like) 570 876 IPR011009 -
Acco01g2021 978 Pfam Leucine Rich Repeat 227 248 IPR001611 GO:0005515
Acco01g2021 978 Gene3D Phosphorylase Kinase; domain 1 573 670 - -
Acco01g2021 978 SUPERFAMILY L domain-like 169 457 - -
Acco01g2021 978 MobiDBLite consensus disorder prediction 18 32 - -
Acco01g2021 978 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 245 359 IPR046959 -
Acco01g2021 978 MobiDBLite consensus disorder prediction 551 571 - -
Acco01g2021 978 MobiDBLite consensus disorder prediction 921 978 - -
Acco01g2021 978 Gene3D Ribonuclease Inhibitor 107 266 IPR032675 -
Acco01g2021 978 Gene3D Ribonuclease Inhibitor 267 364 IPR032675 -
Acco01g2021 978 SMART LRR_typ_2 321 344 IPR003591 -
Acco01g2021 978 SMART LRR_typ_2 370 393 IPR003591 -
Acco01g2021 978 SMART LRR_typ_2 225 248 IPR003591 -
Acco01g2021 978 SMART LRR_typ_2 394 417 IPR003591 -
Acco01g2021 978 SMART LRR_typ_2 297 320 IPR003591 -
Acco01g2021 978 SMART LRR_typ_2 273 296 IPR003591 -
Acco01g2021 978 SMART LRR_typ_2 249 272 IPR003591 -
Acco01g2021 978 SMART LRR_typ_2 345 369 IPR003591 -
Acco01g2021 978 Pfam Leucine rich repeat N-terminal domain 110 143 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2021 Acco-ChrAcco01 36056712 36065277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2021 110 768 Miscellaneous Gene Families AT2G16250 57.895 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Acco01g2021 PK_Tyr_Ser-Thr 4.5e-19 CL0016