Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g2016 ATGTCAACCATCTCCGACCATTCCTCCACCACCAACTTTCCTCTGCATGAACTGTCCAAGACCACACCTTTTCTGGGTTTACAACTCTACATCGTTATTTGCGTTTTCCTCTTCATCTTCCTCTTTCTGGTTCTTCTGATCTTCCTCTGCATTCGCCGGAATTGTACCTCCGACGAGCCCTGTACCATAGCCAGCCAAAGCTCCGGCGTGATTCCGTTGGTCTCCAAGGAGATCGTGGAGGTTGAAGCCTTGAATCTTCTTGGTGTTCAAGAGAAAAAGATTAAGGTTGAAGATCGTGATCGGAGGAGGAAGCAGGTGGAAGAAGAGGAGGAGATCAATGTTGGTGGAGTTGGGAGAGGAAAACAGAGGAACGATGAGAGTGATGCCGCCGTCGACGGTCAGAAGATTGGGTGGGGCCGTTGGTACAGCTTGGAGGAGCTTAAGCTTGCTACACGTGGATTCGCCGACGAGAATGTCATCGGAGAAGGAGGTTATGGAATTGTTTACAGAGGAGTTCTTCAAGATGGCTCTGTAGTTGCTGTCAAGAAACTACTTAACAACAAGGGTCAAGCTGAGAAGGAGTTTAAGGTGGAGGTTGAAGCTATTGGAAAAGTAAAGCATAAAAATTTGGTGGGTTTAATAGGATATTGTGCAGAAGGTGCTCAAAGGATTCTTGTTTATGAATATGTCGAGAATGGAAACTTGGAGCAGTGGTTGCATGGTGAGGTAGGGCCTGCTAGCCCATTGACATGGGATATACGTATGAGGATCGCGATAGGGACGGCTAAAGGGCTAGCCTATTTGCATGAAGGTTTAGAACCCAAAGTTATCCACCGAGATGTGAAATCTAGTAACATTCTTCTTGACAAAAGATGGAACGCCAAGGTATCAGACTTTGGACTGGCCAAACTCTTAGGATCAGAGAAAAGCTATGTGTCTACACGCGTAATGGGGACATTCGGATATGTTTCGCCTGAGTATGCAAGCACGGGCATGCTTAATGAAGGTAATGATGTGTATAGTTTTGGAGTTCTGCTGATGGAGATCATCACTGGAAGAAGTCCCATAGATTATTCTAGATCGCCGGCAGAGATGAACTTGGTTGACTGGTTTAAAGGAATGGTGGCGAGTCGTCGTGGCGATGATCTAGTAGATCCTTCAATTGAGATTAGGCCCTCTCCAAGATCACTGAAGCGAGCTTTGCTGGTTTGTCTGCGCTGCATAGATATGGATGTCTGTAAGAGGCCAAAGATGAGTCAAATAGTTCATATGCTTGAAGCAGATGATTTCCCCTTTCGTTCTGAACTTCGGACAGCAAGAGAGAAAGATCCTGTGCCTTCTCCTGCAGCTGTTTCAAGCAAAATTCCATTTCCATCAAGGCATGTGGAATCAGTTGAGAGATCAAGATGGTGA 1413 0.46 MSTISDHSSTTNFPLHELSKTTPFLGLQLYIVICVFLFIFLFLVLLIFLCIRRNCTSDEPCTIASQSSGVIPLVSKEIVEVEALNLLGVQEKKIKVEDRDRRRKQVEEEEEINVGGVGRGKQRNDESDAAVDGQKIGWGRWYSLEELKLATRGFADENVIGEGGYGIVYRGVLQDGSVVAVKKLLNNKGQAEKEFKVEVEAIGKVKHKNLVGLIGYCAEGAQRILVYEYVENGNLEQWLHGEVGPASPLTWDIRMRIAIGTAKGLAYLHEGLEPKVIHRDVKSSNILLDKRWNAKVSDFGLAKLLGSEKSYVSTRVMGTFGYVSPEYASTGMLNEGNDVYSFGVLLMEIITGRSPIDYSRSPAEMNLVDWFKGMVASRRGDDLVDPSIEIRPSPRSLKRALLVCLRCIDMDVCKRPKMSQIVHMLEADDFPFRSELRTAREKDPVPSPAAVSSKIPFPSRHVESVERSRW 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g2016 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Acco01g2016 470 SUPERFAMILY Protein kinase-like (PK-like) 138 433 IPR011009 -
Acco01g2016 470 ProSiteProfiles Protein kinase domain profile. 154 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2016 470 Coils Coil 89 109 - -
Acco01g2016 470 FunFam Probable serine/threonine-protein kinase At1g01540 134 229 - -
Acco01g2016 470 FunFam Putative receptor-like serine/threonine-protein kinase 230 440 - -
Acco01g2016 470 Gene3D Phosphorylase Kinase; domain 1 120 229 - -
Acco01g2016 470 ProSitePatterns Protein kinases ATP-binding region signature. 160 183 IPR017441 GO:0005524
Acco01g2016 470 SMART serkin_6 154 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2016 470 Pfam Protein kinase domain 155 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g2016 470 PANTHER OS01G0323000 PROTEIN 15 442 - -
Acco01g2016 470 CDD STKc_IRAK 160 426 - -
Acco01g2016 470 Gene3D Transferase(Phosphotransferase) domain 1 230 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g2016 Acco-ChrAcco01 36024205 36027075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g2016 107 428 Trihelix Transcription Factor Family AT1G70460 46.789 5.52e-91 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Acco01g2016 Pkinase 2.9e-46 CL0016