Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1997 ATGGCTGCAGAAGCAACAGCAGAGAAGAAGCTTGAGGATTTTGAACCTCAAAAGAAACCCAAAAGGAACAAATATGCTCTTGCTTGTGCCGTTTTGGCCTCCATGATTTCCATCTTACTTGGTTATGATTTAGGAGTGATGAGTGGGGCGGCCATATATATCCAGAGAGACCTCAAGTTGTCGGACGTCCGACTCGAGATCTTGATGGGGATTATTAATCTATACTCTCTTATTGGCTCTTGCCTCGCCGGAAGAACCTCCGATTGGATTGGCCGTCGATACACCATTGTCCTCGCTGGAGCCATCTTCTTTGCCGGAGCCCTTTTCATGGGATTCTCGACTAACTACGCCTTCCTCATGTTCGGTCGCTTCGTCGCCGGCATTGGCATCGGTTACGCCCTCATGATCGCCCCCGTCTACACCGCCGAGGTCTCCCCGGCTTCCTCTCGTGGCTTCCTCACTTCCTTCCCTGAGGTGTTTATCAATGGAGGAATATTACTTGGATACATTTCAAACTACGCATTTTCGAAGCTGCCACTTCGCTTGGGCTGGCGGCTCATGTTGGGAATCGGCGCCATTCCTTCAGTGCTCTTAGCCGTTGGGGGGTTAGTCATGCCCGAGTCGCCTCGCTGGCTTGTCATGCGTGGTCGGCTCGGCGAAGCCAAGCGAATTCTCGACAAGACCTCAGACTCCAAGGAAGATGCTCGGCTCAGACTAGCCGACATCAAGGAAGCCGCCGGTATCCCCGAAAGCTGCGATGACGAAGTCGTTCAAGTGACCGCCAAGAAAAACATCGGCGAAGGAGTCTGGAAAGAACTGTTCCTCCACCCAACGCCGGCCGTCCGTCACATCTTGATCGCCGCCCTCGGAATTCACTTCTTCCAGCAGGCCTCCGGCGTGGACGCCATTGTCTTATACAGCCCAAAGATCTTCGAAAAGGCCGGCATCACTTCCGACACTGATAAGCTTCTGGCCACCATGGCCGTCGGTTTCGTGAAGACAATTTTCATCCTAGTGGCCACGTTTCTGTTGGATCGGGTCGGGCGACGCCCGTTATTGTTGACTAGTGTGGGTGGTATGATAATCTCAGTCCTCACTCTGGCGGTGAGCCTCACGATCATTGTTCATTCGAAGGCCAAGTTAATGTGGGCCATAGTGTTGAGTATAGTGACAGTGTTGTCGTACGTGGCTACATTTTCGATAGGTGCGGGCCCCATCACGTGGGTTTATAGCTCCGAGATATTTCCGTTGAGGCTACGCGCACAGGGTGCGGCGGCGGGAGTGGTGGTGAATCGGATCACGAGCGGTGTGATCTCATCGACGTTTTTGTCGTTGGAGAAGGCGATTACTATAGGTGGGGCCTTCTTTATGTTTGGGGGAATTGCAACCGTTGGATGGATCTTCTTCTATACCATGCTCCCAGAAACACAAGGGAAGACCCTTGAAGAAATGGGAGGGTCTTTTGGTAAATTCGGACAAAATTACACTGTTGATAAGGAAGTCAACGATAACCACAAGGTTACCGGTAACGGTAACGTTAACGGGCAAATCCAATTGAGTTGA 1563 0.5182 MAAEATAEKKLEDFEPQKKPKRNKYALACAVLASMISILLGYDLGVMSGAAIYIQRDLKLSDVRLEILMGIINLYSLIGSCLAGRTSDWIGRRYTIVLAGAIFFAGALFMGFSTNYAFLMFGRFVAGIGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYISNYAFSKLPLRLGWRLMLGIGAIPSVLLAVGGLVMPESPRWLVMRGRLGEAKRILDKTSDSKEDARLRLADIKEAAGIPESCDDEVVQVTAKKNIGEGVWKELFLHPTPAVRHILIAALGIHFFQQASGVDAIVLYSPKIFEKAGITSDTDKLLATMAVGFVKTIFILVATFLLDRVGRRPLLLTSVGGMIISVLTLAVSLTIIVHSKAKLMWAIVLSIVTVLSYVATFSIGAGPITWVYSSEIFPLRLRAQGAAAGVVVNRITSGVISSTFLSLEKAITIGGAFFMFGGIATVGWIFFYTMLPETQGKTLEEMGGSFGKFGQNYTVDKEVNDNHKVTGNGNVNGQIQLS 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1997 520 ProSitePatterns Sugar transport proteins signature 1. 83 100 IPR005829 GO:0016020|GO:0022857|GO:0055085
Acco01g1997 520 Pfam Sugar (and other) transporter 30 484 IPR005828 GO:0016020|GO:0022857|GO:0055085
Acco01g1997 520 ProSitePatterns Sugar transport proteins signature 2. 125 150 IPR005829 GO:0016020|GO:0022857|GO:0055085
Acco01g1997 520 NCBIfam sugar porter family MFS transporter 15 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Acco01g1997 520 CDD MFS_PLT 32 484 IPR044776 GO:0005351
Acco01g1997 520 Gene3D MFS general substrate transporter like domains 19 490 IPR036259 -
Acco01g1997 520 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Acco01g1997 520 PRINTS Sugar transporter signature 389 410 IPR003663 GO:0016020|GO:0022857|GO:0055085
Acco01g1997 520 PRINTS Sugar transporter signature 120 139 IPR003663 GO:0016020|GO:0022857|GO:0055085
Acco01g1997 520 PRINTS Sugar transporter signature 295 305 IPR003663 GO:0016020|GO:0022857|GO:0055085
Acco01g1997 520 PRINTS Sugar transporter signature 412 424 IPR003663 GO:0016020|GO:0022857|GO:0055085
Acco01g1997 520 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 477 IPR020846 GO:0022857
Acco01g1997 520 FunFam probable polyol transporter 4 19 491 - -
Acco01g1997 520 Coils Coil 225 245 - -
Acco01g1997 520 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 23 490 IPR045262 GO:0015144
Acco01g1997 520 SUPERFAMILY MFS general substrate transporter 15 484 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1997 Acco-ChrAcco01 35767232 35769261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1997 12 514 Organic Solute Cotransporters AT3G18830 70.775 0.0 746