Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1995 ATGGAGACTGAAGAATCCAACAAAAGCACTGAACCCTGCAAAATTATGGTGGTTCAGGATGAAACTGAAAACAAACCTTTGCAGCCGCATTGGTATCCTCCTATACAGGGATACCATTATTCTATGCCTACGCCAGCACATGTTATAAATTCTCATGTAGCTGCCGCCGGTTCTTACTATTATCCTCACATTTGGCCCAACCAGGCTTTCAGCACTCCCCTTCAATATGACCCTCTGCATGATCCCAGCAGGCCCAAGAATAATCCAATTGTTTCTGGGGGCTCTGCGTTGACATTTTCAGATAAAGTACACACGACTTCCAGTGTAGAGGACATGGATTTGGCAAAAACATGTGAAGGGAAAGAATTAAGAGAAAATGGAAATGAATCATCAATTTCCAAAAATGAACAAGATAGAGGGACATGGAGTGCTACAAATGGAAGCATGGGATCATCAGATGAAGGCCTTGACACTGACAATGGTTTTCGTTCAAGTAGGGAGCAGCAATGTAACAAGTTACTTGCAAAAAGGGACCTAACACAGAATGTAGCTAGTATAGAAAATGGTAATGCAGATCATGTGGATAAAGACTCTGCATCACAGCAATTTGCAGTGAATTCAACTGAATCAAATCTGAATCCAGGAACTGGCCTCAATATATCTGGAACTATTCATAGACTTGCAAAACAGGAAGAAGATGAAATAAGAAAAGAAAGAAAAAGGCAATTAAATAGGGAATCAGCTAGGAGATCAAGGATACGTAGGCAGCAAGAATGTGATGAGCTACGTAAAATTATGGATGATCTTGTGAAGAAGAATTCCTTGCTGAAGGACCAGCTTATGAGCCTTTCTGAAGACTGTCTAGAACTCAATAATGAAAACAACTCCTTAGAGGAAGAAATCACCAATATGTATGGGCCAGAAGCAATTGCCGATCTCATAGCCATGAGGCCTGGCGGATTAACTCGTTGA 972 0.4115 METEESNKSTEPCKIMVVQDETENKPLQPHWYPPIQGYHYSMPTPAHVINSHVAAAGSYYYPHIWPNQAFSTPLQYDPLHDPSRPKNNPIVSGGSALTFSDKVHTTSSVEDMDLAKTCEGKELRENGNESSISKNEQDRGTWSATNGSMGSSDEGLDTDNGFRSSREQQCNKLLAKRDLTQNVASIENGNADHVDKDSASQQFAVNSTESNLNPGTGLNISGTIHRLAKQEEDEIRKERKRQLNRESARRSRIRRQQECDELRKIMDDLVKKNSLLKDQLMSLSEDCLELNNENNSLEEEITNMYGPEAIADLIAMRPGGLTR 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1995 323 CDD bZIP_plant_GBF1 237 287 IPR045314 GO:0003700|GO:0006355
Acco01g1995 323 MobiDBLite consensus disorder prediction 231 253 - -
Acco01g1995 323 Pfam bZIP transcription factor 232 294 IPR004827 GO:0003700|GO:0006355
Acco01g1995 323 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 234 297 IPR004827 GO:0003700|GO:0006355
Acco01g1995 323 MobiDBLite consensus disorder prediction 110 132 - -
Acco01g1995 323 MobiDBLite consensus disorder prediction 110 163 - -
Acco01g1995 323 PANTHER G-BOX-BINDING FACTOR 3-RELATED 12 307 IPR044827 GO:0003700|GO:0006355|GO:0043565
Acco01g1995 323 SUPERFAMILY Leucine zipper domain 236 288 IPR046347 GO:0003700|GO:0006355
Acco01g1995 323 Gene3D - 225 292 - -
Acco01g1995 323 SMART brlzneu 232 296 IPR004827 GO:0003700|GO:0006355
Acco01g1995 323 MobiDBLite consensus disorder prediction 133 163 - -
Acco01g1995 323 MobiDBLite consensus disorder prediction 76 95 - -
Acco01g1995 323 Coils Coil 259 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1995 Acco-ChrAcco01 35715489 35718327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1995 29 313 bZIP Transcription Factor Family AT4G36730 25.939 3.99e-23 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco01g1995 bZIP_1 1.8e-10 CL0018