Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1987 ATGTATATATTGATGAGATGTGACTTGATACTAATCACAGCCAGGAGGACAAACACACCTATGAAGACGAAAATGCTGGTTTCTAAGTTAACATACGAAGAATGCAGGCGACAACGGCTAGAAGAAAACAAGAAGAGAATGGAAGAGCTCAACCTCAACAAGCTTGCTTCTGCTTTGAAACCTTCACCTTCACCTCATAAATCTTCCCCTGCGAAGGCTAGGATGCCACGTCAGCCTGTGAGTCCTTCTTCTGCTCCAGCAAGAAGGTCTAGTCGCGTAGCCAGCTTACCTTCTCCAAACTATAAGGATATGAAATTTTTATATGGGAAAATGACTTGTAGGTCCTATCAGAAGAGGGATTTGCTAAATCGAGTTTATGCTTCAGATGAAGTTAGGCAATATGCAATTGATAGAGCTGAAGAACTTCTGTCTAGTTTAGATTCTAAACACCCTAGTTTCATCAAACCTATGCTCCAATCACATGTCACTGGAGGATTTTGGCTAGGTCTTCCAGTTCAGTTCTGTAAAACCCATCTTCCTGACCATGATGAAGCAATAACTCTAATAGATGAGGATGGGAACGAGTCTCCCACCAAATTCCTTGCTGATAAAACTGGTCTTAGTGGTGGTTGGAGGGGTTTCTCAATTGATCATGAACTAGTTGATGGGGATGCATTAGTGTTTCAATTGATCAAACCCACAGAATTTAAGGTGTTCATAATTAGAGCATATAAATCAGAAAACAAAGAGGAAGGAGATGAAGATTTGGATGCTTCACACCTGAACAGGAGCTCCAAAAGAGTCAGAGCAAGTAACTCCCTTTTACAATTTCTCTCTTATAACGCATGTTCTGTTATTCTCTATGAGCATAAAACTAGGTTTTAA 885 0.4034 MYILMRCDLILITARRTNTPMKTKMLVSKLTYEECRRQRLEENKKRMEELNLNKLASALKPSPSPHKSSPAKARMPRQPVSPSSAPARRSSRVASLPSPNYKDMKFLYGKMTCRSYQKRDLLNRVYASDEVRQYAIDRAEELLSSLDSKHPSFIKPMLQSHVTGGFWLGLPVQFCKTHLPDHDEAITLIDEDGNESPTKFLADKTGLSGGWRGFSIDHELVDGDALVFQLIKPTEFKVFIIRAYKSENKEEGDEDLDASHLNRSSKRVRASNSLLQFLSYNACSVILYEHKTRF 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1987 294 Coils Coil 30 57 - -
Acco01g1987 294 ProSiteProfiles B3 DNA-binding domain profile. 153 244 IPR003340 GO:0003677
Acco01g1987 294 SUPERFAMILY DNA-binding pseudobarrel domain 146 242 IPR015300 -
Acco01g1987 294 Gene3D - 130 245 IPR015300 -
Acco01g1987 294 CDD B3_DNA 151 242 IPR003340 GO:0003677
Acco01g1987 294 MobiDBLite consensus disorder prediction 83 97 - -
Acco01g1987 294 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 56 248 IPR044837 -
Acco01g1987 294 Pfam B3 DNA binding domain 153 240 IPR003340 GO:0003677
Acco01g1987 294 MobiDBLite consensus disorder prediction 55 98 - -
Acco01g1987 294 SMART B3_2 153 245 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1987 Acco-ChrAcco01 35620817 35623746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1987 25 265 B3 DNA Binding Superfamily AT3G19184 56.400 1.02e-81 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Acco01g1987 B3 2.9e-13 CL0405