Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1973 ATGGGAGTTTGTGTCTCTAAGCAATCGCAACCGAATCCATACGCGGGTAAGCCAACAGAAGAAGAAGAAGATCATGAGAATCGGTATGAAGATTCTTCTTCTTCTCAAATCCCGAAATCCCCGCTTTCTCCCATCACCAACAACTACCACCGGGAAGATGACGTCACTGCCGGTAAGAAGTCTCCGTTGTTCCCCTTCTACAGCCCCAGTCCAGCTCATTTTCTCAAGAATTCTCCGGCGTCGACGCCGGGAGGGAGCAAGAGCGCGAGTTCGACGCCAAGGAGGTTCTTCCGGCGGCCTCTTCCTCCGCCGTCGCCGGCCAAGCACATAAAGGCTGTGCTGGCAAGGAGGCAGGGGAGGAAGGCTGCGAAAGCTATCCCCGAAGAAGGGGAGGAAGAAGAACCCAGAGATTTGGACAAGAGGTTTGGGTTTTCGAAGGAATTCACGAGTAGATTGGAGGTTGGGGAAGAAATAGGAAGAGGACATTTTGGTTTTACATGCTCTGCTAGGTTCAAGAAGGGTGAACGTAAGGGTCAGCAAGTGGCCGTGAAGGTCATTCCTAAAGCTAAGATGACCACAGCAATTGCAGTTGAAGATGTTAGAAGGGAGGTGAAAATATTACGAGCCTTGACTGGACACAAAAATCTGGCGCAATTCTATGATGCTTTTGAAGATCAAGATAATGTCTACATTGTAATGGAGTTATGTGAAGGAGGCGAGCTGTTGGATAGAATACTTTCAAGAGGAGGGAAATACTCAGAAGATGACGCAAAAGTTGTTATTACACAAATACTGAATGTTGTTGCGTTCTGTCATCTTCAGGGTGTGGTGCACAGGGATCTTAAGCCGGAGAATTTTTTGTATGTTTCAAAGGATGAGAACGCTGAATTAAAAGCTATTGACTTTGGGTTATCAGACTTTGTCAAACCAGATGAAAGGCTCAACGATATCGTGGGCAGTGCATACTATGTGGCCCCTGAAGTTCTGCATAGATCTTATAGTACAGAAGCTGACGTGTGGAGTATAGGCGTGATAGCATATATTCTCTTATGTGGTAGTCGTCCATTTTGGGCCCGAACTGAGTCTGGTATATTCAGGGCTGTTCTAAAAGCTGATCCAAGCTTTGACGAACCTCCTTGGCCATCCTTATCTTCAGAAGGAAAAGATTTTGTTAAGCGCCTGTTGAATAAGGACCCAAGGAAGAGAATATCAGCTGCTCAGGCTCTAAGTCATCCTTGGATTAGGAACTTCAACAATGTAAAAGTTCCTCTTGATATTTTAATATTTAAGCTCATGAAGGCTTATATGCGATCGTCATCCTTGCGCAAGGCCTCTTTAAGGGCACTGTCAAAGACATTGACTGCTGATGAGCTCTATTATCTGAGGGAGCAATTTGCTCTGCTGGAGCCAAGCAAAAATGGTAGTGTAACATTAGAAAACATCAAGATGGCGCTGATAAAACATGCAACAGATGCCATGAAAGAGTCCCACATTTCTGATTTTATTGCCTCGCTAAATCCATTACAATACAGAAGAATGGGTTTTGAAGAATTTTGTGCGGCTGCATTAAGTGTGCATCAGCTTGAAGCACTTGATCGTTGGGAGCAACATGCACGCTGTGCATATGAAATCTTTGAGAAAGATGGAAACAGAGCTATTGTCATTGAAGAACTTGCCTCGGAACTTGGACTAGGCCCTTCTATCCCCCTTCATGTTGTACTTGTGGATTGGATAAGGCACACTGATGGGAAGCTGAGCTTTCTTGGGTTTGTCAAATTGTTACACGGTGTATCTGGCCGAACTCTTTCAAAGGTGCAATAG 1821 0.4509 MGVCVSKQSQPNPYAGKPTEEEEDHENRYEDSSSSQIPKSPLSPITNNYHREDDVTAGKKSPLFPFYSPSPAHFLKNSPASTPGGSKSASSTPRRFFRRPLPPPSPAKHIKAVLARRQGRKAAKAIPEEGEEEEPRDLDKRFGFSKEFTSRLEVGEEIGRGHFGFTCSARFKKGERKGQQVAVKVIPKAKMTTAIAVEDVRREVKILRALTGHKNLAQFYDAFEDQDNVYIVMELCEGGELLDRILSRGGKYSEDDAKVVITQILNVVAFCHLQGVVHRDLKPENFLYVSKDENAELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDEPPWPSLSSEGKDFVKRLLNKDPRKRISAAQALSHPWIRNFNNVKVPLDILIFKLMKAYMRSSSLRKASLRALSKTLTADELYYLREQFALLEPSKNGSVTLENIKMALIKHATDAMKESHISDFIASLNPLQYRRMGFEEFCAAALSVHQLEALDRWEQHARCAYEIFEKDGNRAIVIEELASELGLGPSIPLHVVLVDWIRHTDGKLSFLGFVKLLHGVSGRTLSKVQ 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1973 606 FunFam CDPK-related kinase 1 145 240 - -
Acco01g1973 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Acco01g1973 606 MobiDBLite consensus disorder prediction 1 15 - -
Acco01g1973 606 PANTHER SERINE/THREONINE-PROTEIN KINASE 136 574 - -
Acco01g1973 606 ProSitePatterns Protein kinases ATP-binding region signature. 158 184 IPR017441 GO:0005524
Acco01g1973 606 MobiDBLite consensus disorder prediction 33 50 - -
Acco01g1973 606 SMART serkin_6 152 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1973 606 MobiDBLite consensus disorder prediction 17 32 - -
Acco01g1973 606 SUPERFAMILY EF-hand 446 595 IPR011992 -
Acco01g1973 606 FunFam CDPK-related kinase 1 450 523 - -
Acco01g1973 606 Pfam Protein kinase domain 153 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1973 606 Gene3D Phosphorylase Kinase; domain 1 154 241 - -
Acco01g1973 606 SUPERFAMILY Protein kinase-like (PK-like) 148 454 IPR011009 -
Acco01g1973 606 ProSiteProfiles Protein kinase domain profile. 152 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1973 606 FunFam Calcium-dependent protein kinase SK5 324 418 - -
Acco01g1973 606 CDD STKc_CAMK 153 413 - -
Acco01g1973 606 MobiDBLite consensus disorder prediction 1 107 - -
Acco01g1973 606 FunFam CDPK-related kinase 3 144 316 - -
Acco01g1973 606 Gene3D Transferase(Phosphotransferase) domain 1 242 436 - -
Acco01g1973 606 Gene3D - 437 596 - -
Acco01g1973 606 MobiDBLite consensus disorder prediction 74 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1973 Acco-ChrAcco01 35476314 35480820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1973 58 602 EF-hand Containing Proteins AT3G50530 74.355 0.0 900
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Acco01g1973 Pkinase 6.9e-71 CL0016