Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1953 ATGGCACTTATGGCTAAGCCATACTCAAATAATAAAGCCTTAGGCTGCTTCATCTTTAGCTCCCTCTTCATATCTTCTCTCTCACATTTGCTTCCATCAATCCCAATCCCAATTCCAGAGGATAGCGAATTTTCATTAGGTTTCAATATTGAATTTGATGCCAACTTAACTTTTGAAAATGATAGGCTTAAAAACGCCCATGTTGCTCTTCAGGCATGGAAAAGTGCCATATATTCTGATCCATTGAACACACTTGAAAATTGGGTTGGTTCTGATGTTTGTTCTTATAATGGTGTGTTCTGTGCTGAAGCTCTTGATGACCCTAAATTAACAGTTGTTGCTGGAATTGATCTCAACCATGCAGATATTGCTGGTCGTCTTGTTCCCGAGTTGGGCCTCTTAACAGACATGGCTCTGTTCCATATAAATTCTAATAGGTTTTGTGGGATTGTCCCAGACAGCTTTAAGAATCTCACTCTTATGTATGAGTTTGATATAAGCAACAATAGGTTTGTTGGTGCTTTCCTTTCTGTGGTCCTTACATGGCCAGGCATAAAGTATTTGGATCTTAGGTTTAATGATTTTGAAGGACCTTTGCCTCCACAACTTTTTGAGAAAGACATTGATGCTTTGTTCTTGAACAATAATCGTTTTGTTTCAGCCATTCCAGAAACACTGGGGAACTCCACAGCCTCTGTTGTGACATTTGCTAACAACAAATTCTCAGGTTGCATTCCTAAATCAATTGGGAACATGGTGAACTTGAATGAGATTGTTTTCTTAGGGAATGGTCTCGGAGGTTGTTTCCCACAAGAGATTGGATTGTTGGGAAATGTGACGATTTTTGATGCCAGCCATAATGGGTTTGTTGGGACATTGCCAAACTTGTCAGGTTTGAAGAGTGTGGAGGTAATGGACATTGCACATAATAAGATTTCTGGGTATGTGTCGGACAGTATTTGCAAGCTACCAGGGTTGACCAAATTTTCATTCTCGGACAATTACTTTAATGGAGAAGCTCAATCTTGTGTGCCTTCTTCAAGAGCAAATGTTGTTTTTGATGATAGTAATAATTGTTTGCCTCTGAGATCAAATCAAAAGACGAGCAAGCAATGTTCGCCAGTGGTGACTCGTCCCGTTGATTGTAGCAAGAGTTGTGGAAGCGGTGATGGCAACAACCATACCCCATCAACACCAAAACCACCAAAGGTAGAACCACCGGTTCATTCTTCTCCACCCACCGTCCAATCTCCTCCGCCACCAGTGCACTCTCCACCGCCTCCAGTCCACTCTCCACCCCCGCCGGTGTTCTCTCCTCCGCCCCCAGTCCACTCTCCACCCCCACCGGTGTTCTCTCCTCCTCCTCCTCCTGTCCACTCTCCACCCCCACCGGTGTTCTCTCCTCCGCCTCCTGTCCACTCTCCACCCCCACCTGTGTTCTCTCCTCCGGCCCCTGTTCACTCCCCACCACCACCTGTATTCTCTCCTCCGCCCCCTGTTCACTCCCCACCACCACCTGTATTCTCTCCTCCGCCCCCAGTCCAGTCTCCACCTCCACCCGTGTACTCTCCTCCGCCACTAGTTCACTCCCCTCCACCTCCAGTCCAGTCTCCCCCACCTCCACCCGTGTTCTCTCCACCGCCCCCAGTCCACTCCCCTCCTCCTCCTATGTTCTCTTCCCCACCACCACCAGCATGGGATGATGTCATCTTGCCCCCAATCATCGGGGCCGAATATAGTTCACCACCTCCACCGGCTATTGTTGGATATTAA 1773 0.471 MALMAKPYSNNKALGCFIFSSLFISSLSHLLPSIPIPIPEDSEFSLGFNIEFDANLTFENDRLKNAHVALQAWKSAIYSDPLNTLENWVGSDVCSYNGVFCAEALDDPKLTVVAGIDLNHADIAGRLVPELGLLTDMALFHINSNRFCGIVPDSFKNLTLMYEFDISNNRFVGAFLSVVLTWPGIKYLDLRFNDFEGPLPPQLFEKDIDALFLNNNRFVSAIPETLGNSTASVVTFANNKFSGCIPKSIGNMVNLNEIVFLGNGLGGCFPQEIGLLGNVTIFDASHNGFVGTLPNLSGLKSVEVMDIAHNKISGYVSDSICKLPGLTKFSFSDNYFNGEAQSCVPSSRANVVFDDSNNCLPLRSNQKTSKQCSPVVTRPVDCSKSCGSGDGNNHTPSTPKPPKVEPPVHSSPPTVQSPPPPVHSPPPPVHSPPPPVFSPPPPVHSPPPPVFSPPPPPVHSPPPPVFSPPPPVHSPPPPVFSPPAPVHSPPPPVFSPPPPVHSPPPPVFSPPPPVQSPPPPVYSPPPLVHSPPPPVQSPPPPPVFSPPPPVHSPPPPMFSSPPPPAWDDVILPPIIGAEYSSPPPPAIVGY 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1953 590 PRINTS Proline rich extensin signature 457 482 - -
Acco01g1953 590 PRINTS Proline rich extensin signature 419 435 - -
Acco01g1953 590 PRINTS Proline rich extensin signature 438 455 - -
Acco01g1953 590 PRINTS Proline rich extensin signature 397 418 - -
Acco01g1953 590 MobiDBLite consensus disorder prediction 399 569 - -
Acco01g1953 590 Pfam Leucine rich repeat N-terminal domain 69 101 IPR013210 -
Acco01g1953 590 MobiDBLite consensus disorder prediction 363 378 - -
Acco01g1953 590 MobiDBLite consensus disorder prediction 363 570 - -
Acco01g1953 590 SUPERFAMILY L domain-like 67 351 - -
Acco01g1953 590 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 30 512 - -
Acco01g1953 590 FunFam Leucine-rich repeat extensin-like protein 1 67 228 - -
Acco01g1953 590 Gene3D Ribonuclease Inhibitor 64 365 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1953 Acco-ChrAcco01 35236779 35238551 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1953 14 384 Trihelix Transcription Factor Family AT1G49490 65.608 3.50e-176 519