Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1911 ATGTCTTCCTCCGGCCGATCCATTCTTGCCGGAGCTCCGATGACATCCAACTCCACTCAGCCGCCGCCGAACTTCTTCTACAGCGATCAAGAACACTCCGTCATCGTTGAGGCACTCACCAATGTCGTCGTCGGTTCCACCAGCACGATCTCGGCCACCACCTCCAGCGATTTTATCCAAGAGATTCGATTTCCTCCTACATTTGATTACTCCGATGCGCTATCGGCGACAACCTCGGCCCCAGTCGGACTCGTTCCGGCCATGAGCGTCGAGACTTGCGGAGAATGCAAAATCGAAGGGTGCTTAGGTTGCAAATTTTTCCCAGAGGAGAAAAAGAAAAGTGGAGGGAAAAAGAAGACGGCGACGACGTCGTCGAAGAAGAAAAAGTACAGAGGAGTGCGCCAGAGGCCGTGGGGAAAATGGGCCGCTGAGATCCGAGACCCGAGAAGGGCGACCCGGGTTTGGTTGGGTACGTTCAATACCGCAGAGGAAGCCGCACGCGCTTACGATAATGCGGCGATTGAATTTCGCGGGCCGCGAGCGAAACTCAATTTCCCGTTTCCTGATAACTCGTTGAGTGATTCGCATTCCCAAACAGAGCAATTGGAAGTAGAACGCTCAGAGTCAGCATTGGAGCAAGCAGAGGAGAGAAATAGAAACTCAAATCCTGAGAATTACAGAGACGATGTTTGGACGATGGGAATTGGGAATTGTAAGGAAAATGAATTCTTTGATGGACTTGGAGACCCAGAATTTCAGCAATGGATGACGATGATGATGGATTTTGGAGGGGATTCTTCGGACTCTGCTACCACTCATAGCCAGAGTCCTCATAGTTGGTGA 843 0.5125 MSSSGRSILAGAPMTSNSTQPPPNFFYSDQEHSVIVEALTNVVVGSTSTISATTSSDFIQEIRFPPTFDYSDALSATTSAPVGLVPAMSVETCGECKIEGCLGCKFFPEEKKKSGGKKKTATTSSKKKKYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAARAYDNAAIEFRGPRAKLNFPFPDNSLSDSHSQTEQLEVERSESALEQAEERNRNSNPENYRDDVWTMGIGNCKENEFFDGLGDPEFQQWMTMMMDFGGDSSDSATTHSQSPHSW 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1911 280 PRINTS Ethylene responsive element binding protein signature 130 141 IPR001471 GO:0003700|GO:0006355
Acco01g1911 280 PRINTS Ethylene responsive element binding protein signature 152 168 IPR001471 GO:0003700|GO:0006355
Acco01g1911 280 PANTHER DNA-BINDING DOMAIN 110 219 IPR044808 GO:0003700|GO:0009873
Acco01g1911 280 MobiDBLite consensus disorder prediction 207 229 - -
Acco01g1911 280 MobiDBLite consensus disorder prediction 207 224 - -
Acco01g1911 280 Gene3D AP2/ERF domain 128 187 IPR036955 GO:0003700|GO:0006355
Acco01g1911 280 FunFam Ethylene-responsive transcription factor 2 128 187 - -
Acco01g1911 280 MobiDBLite consensus disorder prediction 261 280 - -
Acco01g1911 280 ProSiteProfiles AP2/ERF domain profile. 129 186 IPR001471 GO:0003700|GO:0006355
Acco01g1911 280 MobiDBLite consensus disorder prediction 1 24 - -
Acco01g1911 280 Pfam AP2 domain 129 178 IPR001471 GO:0003700|GO:0006355
Acco01g1911 280 MobiDBLite consensus disorder prediction 264 280 - -
Acco01g1911 280 SMART rav1_2 129 192 IPR001471 GO:0003700|GO:0006355
Acco01g1911 280 CDD AP2 128 186 IPR001471 GO:0003700|GO:0006355
Acco01g1911 280 SUPERFAMILY DNA-binding domain 129 187 IPR016177 GO:0003677
Acco01g1911 280 Coils Coil 197 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1911 Acco-ChrAcco01 34791944 34792786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1911 29 195 AP2-EREBP Transcription Factor Family AT4G34410 46.392 6.67e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco01g1911 AP2 5.5e-16 CL0081