Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1897 ATGGTTACTGTGGCTGGAATTCTTGGGAAGGCGGCTGATCCAAAACCACTAAAGGATGAGTCTTTCTCAGCCATGCCTATGCCTTTTGGGAACCTAGTCACACAAACACACTCTCTTTCACGCGCTCCCACAAGCACTCATGTGTCACTCGCAGACGCTGAAATCGCTGCCCTCTGGTCTCCTTCAACCCTTGCACTTTGCAGTTCCTGTTGCAGCACCGTCTTATTTCAAAACTCAACTATGCTCCCTGGGATTGCCTTTTCCTTGTTTGGGCTTTTGGCCATCTTGGCAGTGCAACTTCCTGCAATAATGGCTGATTGCCCTTTGGATTTGAGTACTTCAAACTTTACAATGGCATCCACTGTCTGCGCAGAACAAAGCGACAGAAATAGTTGCTGTCGCTTCATTAATGCTAATATTGCCGTTTCTGTTGCTCGATATGCAAATGAAACAGCTAACCTTGGAGTCCCTCCAGATGCTTCTGTCTTCTGCCTCCAGACCATAACTGAGACTTTGCAACTTTATGGAGTTTCACCAAATGCAGCTGTTTTCTGTGGTTTTGGGACAAAAGTCCCTGTTGATTATGAGTGTAAAGGTCGAACTACTGTCACACAGATGCTGCAATCTCCCAGATTTGGAGAGGTCACCGAGAACTGCAAAGTGCCTCTTGTAAAGGAAAGTGACTGCAAGAAATGTTTGAATACTGCCATTGGTTACCTACATAATATAATCGGTGTACAAGATAATATCACATTGAGTACATGCCGTGATGCTACTTTTACTGCATTGGCAAGCCAAGTTGATGATATGTCCACTATTGAAATTGCAAGCTGTTTCTTTGGGGTTCAAGGACTTCTCGGGCCTACTGGTATGAATGCTTCAGAGCCATCCACTTCACCAACTCCTGAGGCTTTTCCGAGTCCTCCGGCTGCTGATAGCCCAAATCCATTGCAGTTAGGTGCACCACTTAAAAGAAATCACCATAGATACCACTTGACATTAATTCCAGGTATTGGTATTGCCGTCACAACCGTTGCAGTCATGATGCTCATAGTCTTGATAGTTTTAATTCGTCAAAAAAGCAGAGAGCTAGGGGGTCCTGATCATTTAAGTAAAACCTCCTCAAAATCCTTGGCCCCCCGTGCAACATGGAGATTTCAGGATGGGCCTTCGTCTACATTTCGAAAATTCAACTATAGCGAGATAAAGAAAGCCACAGATGATTTTAGCACTATAATTGGGCAAGGAGGATTTGGAACTGTGTATAAAGCTCATTTTAGTGATGGTCTACTGGCGGCAGTAAAGCAAATGGATAAAGCATCAGAGCAAAAAGGGGATGAGTTCTGTAGAGAAATAGAGCTTGTTGCCCGGCTTCATCACCGCCATCTAGTTGCATTAAGAGGATTTTGCATTAAAAAACATGAGAGGTTTCTGGTGTACGAGTACATGGAAAATGGAAGCTTGAAAAATCATCTTCATTCCCCTGGGAAAACACCTCTAAGCTGGCGAACAAGAATTCAAATTGCCATTGATGTGGCTAATGCACTGGATTACCTTCATTTCTATTGTGATCCCCCTCTCTGCCACAGAGACATTAAGTCTAGCAACATCTTACTCGATGAGAAATTTGTTGCGAAGCTAGCTGATTTTGGACTGGCACACGCTTCAAAGGATGGTTTGATATGCTTTGAACCAGTAAATACTGATATTCGGGGAACTCCAGGTTATATGGATCCAGAATATGTTGTTACTCAGGAACTCTCCGAGAAAAGCGATATTTACAGTTTTGGTGTGGTATTATTAGAGATTGTAACCGGAAGACGGGCTATTCAAGATAATAAGAATCTGGTGGAATGGGCAAAACCATTCATGGAATCTGAATCAAGATTGATGGAGTTAGTGGATCCCAATGTGAGGGAATCTTTTGATTTGGATCAGCTCCAGACAGTTGTCTCTATAGTAGGATGGTGCACTCAGAGAGAAGGCAGGGCAAGGCCTTCAATAAAACAGGTCCTTAGACTTCTGTATGAGACTTCAGAGCCTATGCACAGTGGATTTTTACAAGCTGTTGAAGATGAAGAATATATAGTAAATCAACAATCTGGCAGAAGAAGCAAGGGAAAATTACACAGAAATGAACCAAATTCTCACTGTGGGGATGGAAGATATCTAGCTTCTTCTTCAAGTACATCCAGGTCATATTGCAGTAGAAGTTTCTTACTTGAGACAGGATCTCCACAGTCCCCTCAAAACATTTTCTCAGTTTAA 2268 0.429 MVTVAGILGKAADPKPLKDESFSAMPMPFGNLVTQTHSLSRAPTSTHVSLADAEIAALWSPSTLALCSSCCSTVLFQNSTMLPGIAFSLFGLLAILAVQLPAIMADCPLDLSTSNFTMASTVCAEQSDRNSCCRFINANIAVSVARYANETANLGVPPDASVFCLQTITETLQLYGVSPNAAVFCGFGTKVPVDYECKGRTTVTQMLQSPRFGEVTENCKVPLVKESDCKKCLNTAIGYLHNIIGVQDNITLSTCRDATFTALASQVDDMSTIEIASCFFGVQGLLGPTGMNASEPSTSPTPEAFPSPPAADSPNPLQLGAPLKRNHHRYHLTLIPGIGIAVTTVAVMMLIVLIVLIRQKSRELGGPDHLSKTSSKSLAPRATWRFQDGPSSTFRKFNYSEIKKATDDFSTIIGQGGFGTVYKAHFSDGLLAAVKQMDKASEQKGDEFCREIELVARLHHRHLVALRGFCIKKHERFLVYEYMENGSLKNHLHSPGKTPLSWRTRIQIAIDVANALDYLHFYCDPPLCHRDIKSSNILLDEKFVAKLADFGLAHASKDGLICFEPVNTDIRGTPGYMDPEYVVTQELSEKSDIYSFGVVLLEIVTGRRAIQDNKNLVEWAKPFMESESRLMELVDPNVRESFDLDQLQTVVSIVGWCTQREGRARPSIKQVLRLLYETSEPMHSGFLQAVEDEEYIVNQQSGRRSKGKLHRNEPNSHCGDGRYLASSSSTSRSYCSRSFLLETGSPQSPQNIFSV 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1897 755 SMART serkin_6 407 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1897 755 MobiDBLite consensus disorder prediction 290 316 - -
Acco01g1897 755 SUPERFAMILY Protein kinase-like (PK-like) 389 678 IPR011009 -
Acco01g1897 755 MobiDBLite consensus disorder prediction 700 728 - -
Acco01g1897 755 CDD STKc_IRAK 413 675 - -
Acco01g1897 755 ProSitePatterns Protein kinases ATP-binding region signature. 413 435 IPR017441 GO:0005524
Acco01g1897 755 FunFam Putative receptor-like protein kinase 483 683 - -
Acco01g1897 755 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Acco01g1897 755 FunFam Putative receptor-like protein kinase 375 482 - -
Acco01g1897 755 Pfam Protein kinase domain 411 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1897 755 Gene3D Transferase(Phosphotransferase) domain 1 483 702 - -
Acco01g1897 755 PANTHER OS01G0750732 PROTEIN 242 702 - -
Acco01g1897 755 ProSiteProfiles Protein kinase domain profile. 407 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1897 755 Pfam SPARK 105 243 IPR043891 -
Acco01g1897 755 Gene3D Phosphorylase Kinase; domain 1 385 482 - -
Acco01g1897 755 MobiDBLite consensus disorder prediction 301 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1897 Acco-ChrAcco01 34616785 34621020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1897 105 754 Receptor kinase-like Gene Family AT3G19300 59.356 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Acco01g1897 Pkinase 9.4e-50 CL0016