Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1858 ATGGAAACACACATACACTTGCCTTATAATGATCACTGCAAAATGATCTTCTTCTTCGCAACTATTTTGTTGTGTATCGTCACAGTAAACCCTGAAATCGTCCATGAAGCTCCATCGCCAATAGTCCCTGAAATCTTAAACTTCATAGACCAAAGAATCGCCTTGGTCTTCCCAATCATCCAAACCTTTAAGAACACAATAACCTCGGACCCATTAGGCGTGACCAAAACCTGGGTTGGTCCCAACATTTGCAACTACACTGGCTTCTACTGTGACAACCCTCCTGACAACCTCACTGCCACCACCGTCGCCTCCATCGACTTCAACGGCTTCCAGCTGGCGGCGCCAAGCCTTGAGGGGTTCATCGATAAGCTGCCGGACTTGGCTCTCTTCCATGCCAACTCCAACAACTTCTCAGGGACAATACCGCCAACAATATCCAAGTTGAGGTTTCTGTATGAGCTTGATGTGAGTAATAACTTGCTTTCCGGGACGTTTCCTGTGGCGGTTCTGGACTTGCCTGACCTGACTTTCTTGGATATTCGGTTCAACTTGTTCTCCGGCAAGGTTCCGCCGCTGATTTTCATGAAGAGCCAGCTGAACGTGTTTTTCCTCAACGACAATAATTTCATACAGAACCTTCCCGGTGACTTGGGAGACACCAAGGTTCTGTATCTCACTTTAGCTAATAACAAATTCACCGGACCCATTCCCCGGAGCGTCGGAAGAGCCTCGGAAACTTTGTTGGAGATCTTATTCCTCAACAACCAGTTATCAGGTTGTCTTCCTTACGAAATAGGGTTTTTAAGAAAGCTGAGACTCCTGGACGCCAGCTACAACCGCTTGACAGGGCCGTTGCCTTGCTCGCTGGGGTGTTTGGAGGCAGTGGGGCAACTGAACCTGGCCGGAAACTTGTTGTACGGACATATTCCGGAGGTGGTGTGTTCGATGAGGAATCTGGTGAACCTATCATTATCGGATAATTACTTTTCAAGAGTAGGACCACTGTGCAGAAAGCTGATAAAAAGAAGGGTACTTGACGTGAGGAAGAACTGTATTGACGGGTATGGGTTTTCCGATCAGAGACCCATTGAAGAGTGCTTTCGATTCTACATGCAACTGAGGCCTTGTTTCAATCCGGCGTCGTTTAGTTTCATACCTTGTAAAGTTTCTCCATGGAAGCATCCTAAAGTTGGCCTTACGCCTAACAGACATCCACTGTCCTATTCTGCTCTTTCCAGAACCAAAAATGTAGGGAGGATACAAATGTAA 1272 0.4693 METHIHLPYNDHCKMIFFFATILLCIVTVNPEIVHEAPSPIVPEILNFIDQRIALVFPIIQTFKNTITSDPLGVTKTWVGPNICNYTGFYCDNPPDNLTATTVASIDFNGFQLAAPSLEGFIDKLPDLALFHANSNNFSGTIPPTISKLRFLYELDVSNNLLSGTFPVAVLDLPDLTFLDIRFNLFSGKVPPLIFMKSQLNVFFLNDNNFIQNLPGDLGDTKVLYLTLANNKFTGPIPRSVGRASETLLEILFLNNQLSGCLPYEIGFLRKLRLLDASYNRLTGPLPCSLGCLEAVGQLNLAGNLLYGHIPEVVCSMRNLVNLSLSDNYFSRVGPLCRKLIKRRVLDVRKNCIDGYGFSDQRPIEECFRFYMQLRPCFNPASFSFIPCKVSPWKHPKVGLTPNRHPLSYSALSRTKNVGRIQM 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1858 423 Gene3D Ribonuclease Inhibitor 58 250 IPR032675 -
Acco01g1858 423 Gene3D Ribonuclease Inhibitor 251 376 IPR032675 -
Acco01g1858 423 SUPERFAMILY L domain-like 64 353 - -
Acco01g1858 423 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 39 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1858 Acco-ChrAcco01 34145640 34147566 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1858 27 383 Leucine-rich Repeat extension Gene Families AT3G24480 42.017 1.29e-80 255