Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1856 ATGGACACTATCACCATCTCTTTCTTTGTCCTTTCATTCTTATTATTATCTTCTTCCTTCCTTCATTCTTCACTCTCTGTTTTTTCTGCAGAGCTCCCTCGCTCTGAAAGAGAAGCATTACAGAGCATCAACGGAGAAGCAGGGGATAATGCCCCTACTCCTTCCCCTGACGGCGGCGGCGACCCTCCTCCGGCCAACTGCGGATGCACCCCTCCACCGCCTCCGCCGCTGCTGTCTCTTCGTCTGCTGAAAGCACGTCTTGTGCTTCTGCGATTCGCCGCCACAATCGACGACCCCACCGGCTTCACCAAAAACTGGACGGAAGGTGTCAGCCCTTGTGATTACAGAGGAGTTAAATGCGAGAAGTATCATAATTCAGATGAGCTTGCCGTTTCAGGTTTAGATTTCAACCAAGCTGGTTTCTCTCCTCTTCAAGGTTCCAGCTTGGATCTCACTCTAATCCTCGGAATCCCCGAACTAACATTCTTCCATGCTAACTCCAACAACTTCACAGGATCAGTCCCCAAAGAAATCACTAAATACCCATTTTTCTTCGAGCTCGATCTAAGCAACAACAAGCTCAAAGGTTATTTCCCATGGCAAGTTCTATTTGCTGAGCAACTCATTTTCTTAGATCTCCGGTTCAATAGCCTCACTGGTCCGGTCCCACCATCACTCTTCTTTCTTGATCTAGACGTCATCTTCATCAACAACAACAACTTCTTCGGATACCTTCCATGGAATTTCGGCTTCACACCGGCGAGATACCTCACATTCGCCAACAACAAGTTCATCGGACCGATCCCACGAAGCATAGGACTAGCTTCAAAAACCTTAACGGAAGTTCTGTTCTTGGGGAACCAGTTTTCTGGGTGCTTACCTTTTGAAATTGGGTTCCTAAAAAACGCAGTAGTGTTTGATGTGAGCAAGAACTTGTTGACGGGTCCAATCCCAGAATCATTCGCTTGCTTAGAGAAGATTCGGTACTTGAATTTAGCTAACAACAGATTCTACGGTGCTGTGCCGGAATCTGTGTGCCAGCTTCCTGAGATTCGAACTGACGGGAATTTTTCCTTGGCGGGTAACTATTTCACTAAAGTTGGACCTGAATGTATGAAGCTGATAAAATCAAAGGTGCTTGATGTGAGCCAGAATTGCATAAAGGACCTTCCTAATCAGAGATCGCCTGAAGAATGTGAAAAGTTTTTGTCTTGTGTGAAGCCATGTCCGAATGCGAGGTCTCTTACATACGTTCCATGTAAGAAGCACGATTATTCTAAGTACGTCGATACGGCTTTTCCGCCTCCTGCTCCTGTCACTTACGAGGCTCTCAAGCCCACACGGCATCGTTTGATGTGA 1359 0.4665 MDTITISFFVLSFLLLSSSFLHSSLSVFSAELPRSEREALQSINGEAGDNAPTPSPDGGGDPPPANCGCTPPPPPPLLSLRLLKARLVLLRFAATIDDPTGFTKNWTEGVSPCDYRGVKCEKYHNSDELAVSGLDFNQAGFSPLQGSSLDLTLILGIPELTFFHANSNNFTGSVPKEITKYPFFFELDLSNNKLKGYFPWQVLFAEQLIFLDLRFNSLTGPVPPSLFFLDLDVIFINNNNFFGYLPWNFGFTPARYLTFANNKFIGPIPRSIGLASKTLTEVLFLGNQFSGCLPFEIGFLKNAVVFDVSKNLLTGPIPESFACLEKIRYLNLANNRFYGAVPESVCQLPEIRTDGNFSLAGNYFTKVGPECMKLIKSKVLDVSQNCIKDLPNQRSPEECEKFLSCVKPCPNARSLTYVPCKKHDYSKYVDTAFPPPAPVTYEALKPTRHRLM 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1856 452 MobiDBLite consensus disorder prediction 45 71 - -
Acco01g1856 452 Pfam Leucine rich repeat N-terminal domain 86 120 IPR013210 -
Acco01g1856 452 Gene3D Ribonuclease Inhibitor 253 417 IPR032675 -
Acco01g1856 452 Gene3D Ribonuclease Inhibitor 84 252 IPR032675 -
Acco01g1856 452 MobiDBLite consensus disorder prediction 56 71 - -
Acco01g1856 452 SUPERFAMILY L domain-like 84 387 - -
Acco01g1856 452 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 10 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1856 Acco-ChrAcco01 34137678 34139036 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1856 81 404 Leucine-rich Repeat extension Gene Families AT3G24480 42.025 6.07e-73 236