Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1855 ATGGACACCATATCTTTCTCTGTTCTTTCATTTTTATTACTATCTTCTTCCTTCTTCCACTCTTCACTCTCAGATTTTTCTTATGACCACCCTCCTCCTGTCCACTACCACCACCCACCGCCCCCTCCGCCGTTGACCCGGCTGGAGAGAGCACGCCGTGTTCTTTTGAAATTCGCCAACACAATCGACGACTCCAATGACTTCACCAAGAACTGGCGTGGTTCCGACCCGTGTGAATTCAGAGGAGTTAAATGTGCTGATAAGTATCCAAATTCAAATGAGGAAGCCGTTTCAGGATTAGATTTCAACCACGCTGGTTTCTCTCCTCGTCAAGGTTCAAACTTTGACCTCTCAGGAATCCTGGGAATCCCAGAATTAACATTCTTCCATGTCAACTCCAACAATTTCTCTGGACAAATCCCCACAGAAATCACTAAATACCCATATTTCTACGAGCTCGACTTAAGCAATAACAAGCTCCAAGGTGAATTCCCAAGAGAAGTTCTTTCTTCGAAGCAACTAATTTTCGTTGATCTCAGGTACAATAAACTCACTGGACCAGTTCCTCCAGGACTATTTAACATGGATCTAGACGTCATCTTCATCAACAACAACAAATTCAGCAGCAACCTTCCATGGAATTTCGGAAACACACCTGCGAGATACCTCACATTCGCTAACAACAAATTCACAGGACCAATCCCAAGTAGCATAGGAAATGCGTCAAAAACCTTAACCGAAGTTCTGTTCTTGAAAAACCAACTTTCTGGGTGTTTACCTTACGAGATTGGGTTCCTGCAAAAGGCCATAGTCTTTGATGTGAGCAACAACACATTGACGGGTCCAATCCCAGAATCTTTCGCTTGCTTAAACAAGATTCGGTTCTTGAATCTAGCTCACAACAAATTCTATGGTCCTGTTCCAGAATCAGTGTGCGAGCTTTCTGGGATTCGCAACGATGGGAATCTTACGTTAAGGGATAATTATTTCACTGAAGTTGGACCTAAATGCAAGGAGTTGATTAAGTCAAAGGTGCTTGATGTGAGTAAGAATTGCATAAAGGGGCTTCCCGATCAGAAATCACATGACGAATGCTACAAGTTTTTGTCTTGTGTGAAGCCATGTCCCAATGAATGGTCTCTCAAGGTCGTTCCATGCAAGAAACACAATCCGAAGTACGATGAAACGGCTCCGCCTCCTGCGCCTGTGACGTACGAGTCTCTGAATCCGAACCGACATCGTTTAATGTGA 1251 0.4388 MDTISFSVLSFLLLSSSFFHSSLSDFSYDHPPPVHYHHPPPPPPLTRLERARRVLLKFANTIDDSNDFTKNWRGSDPCEFRGVKCADKYPNSNEEAVSGLDFNHAGFSPRQGSNFDLSGILGIPELTFFHVNSNNFSGQIPTEITKYPYFYELDLSNNKLQGEFPREVLSSKQLIFVDLRYNKLTGPVPPGLFNMDLDVIFINNNKFSSNLPWNFGNTPARYLTFANNKFTGPIPSSIGNASKTLTEVLFLKNQLSGCLPYEIGFLQKAIVFDVSNNTLTGPIPESFACLNKIRFLNLAHNKFYGPVPESVCELSGIRNDGNLTLRDNYFTEVGPKCKELIKSKVLDVSKNCIKGLPDQKSHDECYKFLSCVKPCPNEWSLKVVPCKKHNPKYDETAPPPAPVTYESLNPNRHRLM 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1855 416 Pfam Leucine rich repeat N-terminal domain 51 85 IPR013210 -
Acco01g1855 416 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 212 307 - -
Acco01g1855 416 MobiDBLite consensus disorder prediction 394 416 - -
Acco01g1855 416 Gene3D Ribonuclease Inhibitor 48 220 IPR032675 -
Acco01g1855 416 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 7 400 - -
Acco01g1855 416 SUPERFAMILY L domain-like 50 354 - -
Acco01g1855 416 Gene3D Ribonuclease Inhibitor 221 373 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1855 Acco-ChrAcco01 34132645 34133895 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1855 47 370 Trihelix Transcription Factor Family AT1G12040 39.571 8.14e-75 246