Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1854 ATGGACACAATCTCTTTCTCTGTTCTTTCATTGTTATTACTATCTTCTTCCTTGTTTCACTCTTCAGTACTCTCAGCTTCTTCTCCAGAAAGAGAAACATTGGAGATAGGGATCATCATCGGAGGTGGCGGAGATGATCATGCCCCTGCTCCTCCCGTCAACTGCCCACCTCCTCCGCCGCCACCTCCGCCTTCTAGGCTGGAGAAAGCACGGCGGGTGCTTCTGAAATTCGCCACCACAGTCAACGACCCCAATTTCTTCACCAACAACTGGAATGGTCCCAACCCTTGTCAATACAGAGGAATAAAATGTGACAAGTATCCAAATTCTAGTGAGCAAGCAGTTTCAGGATTAGATTTCAACCAAGCTGGCTTCTCTGATCGTCGAGGTTCAAACTTGGGCCTCACCGGAATCCTAGATTCCATTCCAGAATTAGCATTCTTCCATGTCAACTCCAACAATTTCTCTGGACAAATCCCCTCACAAATAACTAAATACCCATTTTTCTACGAGCTCGATCTAAGCAACAACAAGCTCGTGGGTGAATTCCCAAGAGATGTTCTTTCTTCAAAGCAACTACTTTTCGTTGATCTCAGGTTCAATAACCTCACTGGACCAGTCCCTCCAGAACTATTCAACATGGATCTAGACGTCATCTTCATCAACAACAATAAATTCAGCAGCAACCTTCCATGGAATTTCGGAAACACACCTGCGAGATACCTCACATTCGCCAACAACCAATTCACAGGACCAATCCCTAGTAGCATAGGAAATGCGTCAAAAACCTTAACCGAAGTTCTGTTCCTGAAAAATCAATTTTCTGGGTGTTTACCTTACGAGATTGGGTTCCTGAAAAAGGCCATCGTCTTTGATGTGAGCAGCAACTCGTTGACGGGTCCAATCCCAGAATCTTTCGCTTGCTTACAGAAGATTCGGTTCTTGAATTTAGCTCACAACAAATTCTACGGCTCCGTTCCAGAATCAGTGTGTGAGCTTCCTGGGATTAGCAACAATGGGAATCTTACGTTAACGGATAATTACTTCACTGAAGTTGGACCTAAATGCGAGAAGCTGATAAAATCGAAGGTGCTTGATGTGAGCGGGAATTGCATAAAGGAGCTTCCCAATCAGAAATCGCCTGAAGAATGTCACAAGTTTTGGTCTTACGTGAAGCCATGTCCCAATGAATGGTCTCTAAAGATTGTTCCATGTAAGAAACAATATCCCAAGTACGATGAATCGGCTGCTTCTTCTCCTGCGCCTGTGACTTACGAGTCTCTGACGCCGACACGTCATCGTTTAATGTGA 1311 0.4462 MDTISFSVLSLLLLSSSLFHSSVLSASSPERETLEIGIIIGGGGDDHAPAPPVNCPPPPPPPPPSRLEKARRVLLKFATTVNDPNFFTNNWNGPNPCQYRGIKCDKYPNSSEQAVSGLDFNQAGFSDRRGSNLGLTGILDSIPELAFFHVNSNNFSGQIPSQITKYPFFYELDLSNNKLVGEFPRDVLSSKQLLFVDLRFNNLTGPVPPELFNMDLDVIFINNNKFSSNLPWNFGNTPARYLTFANNQFTGPIPSSIGNASKTLTEVLFLKNQFSGCLPYEIGFLKKAIVFDVSSNSLTGPIPESFACLQKIRFLNLAHNKFYGSVPESVCELPGISNNGNLTLTDNYFTEVGPKCEKLIKSKVLDVSGNCIKELPNQKSPEECHKFWSYVKPCPNEWSLKIVPCKKQYPKYDESAASSPAPVTYESLTPTRHRLM 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1854 436 Gene3D Ribonuclease Inhibitor 239 392 IPR032675 -
Acco01g1854 436 MobiDBLite consensus disorder prediction 47 67 - -
Acco01g1854 436 MobiDBLite consensus disorder prediction 50 67 - -
Acco01g1854 436 Gene3D Ribonuclease Inhibitor 67 238 IPR032675 -
Acco01g1854 436 MobiDBLite consensus disorder prediction 413 436 - -
Acco01g1854 436 Pfam Leucine rich repeat N-terminal domain 70 105 IPR013210 -
Acco01g1854 436 SUPERFAMILY L domain-like 68 372 - -
Acco01g1854 436 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 8 418 - -
Acco01g1854 436 FunFam Leucine-rich repeat receptor protein kinase EMS1 231 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1854 Acco-ChrAcco01 34117915 34119225 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1854 50 394 Leucine-rich Repeat extension Gene Families AT3G22800 41.880 5.79e-78 248