LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco01g1853	ATGGACTCCATCTCTTACTGTATCCTTTCACTCTTACTATCTTCTTCCTTGCTTCACTCATCACTACCCTCAGCTTTCTCTACAGAAATCCCTCACTCTGAAAGAGAAGCATTAGAGATCATCATCGGCGGAGGAGGAGCCCCTTCTCCTCCCGCCAACTGCCCCCCTCCCCCTCCGCAGCTGTCCCAACGGCTGTTGAACGCGCGTCTTATGCTTCTGAAATTCAAAGCCACAATAGAAGACAAAAATTGCTTCACCAGCAACTGGAAGGATGGTGTCAGCCCTTGTACCTACCGCGGTATTAAGTGTGCCACTTACCCTGATAGGAAGAAAGAGAAAGCCGTTGCGGGATTAGATTTCAACCAAGCAGGTTTTGCTGGTCGTCAGGGTTCAAAATTGAGTCTTTCAGGAATCTTGGATTCCATTCCAGAATTAGCATTCTTCCATGTCAACTCCAACAATTTCTCTGGACAAATCCCCACAAAAATCATGAGTTTCCCATTTTTCTTCGAACTCGACCTAAGCAACAACAAGCTCCAAGGTTGTTTCCCCATGGAAGTTCTTTCAAATAGGCAGCTTCTTTTCTTAGATCTCAGGTTCAATAGCCTCACTGGACCAATCCCTCCAAAGCTATTCACCATGGATCTAGACGTCATCTTCATCAACAACAACAAATTCAGCGGCAGCCTTCCATGGAATTTCGGAAACACACCTGCGAGATACCTCACATTCGCCCGCAACTCGTTCACTGGTCAAATCCCAAAAAGCATAGGAAATGCGTCAAACACGTTGACTGAAGTTCTGTTCCTGGGAAACCAGTTTTCTGGGTGTTTGCCTTATGAGATTGGATTCCTGAAAAAGGCCACAGTCTTCGATGTGAGCAACAACTTGTTGACGGGTCCAATCCCAGAATCTTTCGCCTGCTTACAGAAGATTCGATACTTGAATCTAGCTCACAACAAATTCTACGGCTCTGTTCCAGAATCTGTGTGCGAGCTTCCTGGGATTCGAAACAATGGGAATCTTACGTTGGCGGGTAATTATTTCACTTACGTTGGACCTGAATGTAAGAAGCTGATACATTCGAAGGTGCTTGATGTGAGCCAGAATTGCATAAAGGGACTCCCTAATCAGAAATCGCCAGAAGAATGTCACAAGTTTCTATATTATGTGAAACATTGTCCGAATGAATGGTCTCTTAAGATTGTTCCGTGTAAGAAAGGCTATTCTGAGTACGATGAAACGGCGTCGCCTCATCCTGCACCTGTGACGTATGAGTCTCTGAAGCCGACACGACATCGTTTAATGTGA	1311	0.4539	MDSISYCILSLLLSSSLLHSSLPSAFSTEIPHSEREALEIIIGGGGAPSPPANCPPPPPQLSQRLLNARLMLLKFKATIEDKNCFTSNWKDGVSPCTYRGIKCATYPDRKKEKAVAGLDFNQAGFAGRQGSKLSLSGILDSIPELAFFHVNSNNFSGQIPTKIMSFPFFFELDLSNNKLQGCFPMEVLSNRQLLFLDLRFNSLTGPIPPKLFTMDLDVIFINNNKFSGSLPWNFGNTPARYLTFARNSFTGQIPKSIGNASNTLTEVLFLGNQFSGCLPYEIGFLKKATVFDVSNNLLTGPIPESFACLQKIRYLNLAHNKFYGSVPESVCELPGIRNNGNLTLAGNYFTYVGPECKKLIHSKVLDVSQNCIKGLPNQKSPEECHKFLYYVKHCPNEWSLKIVPCKKGYSEYDETASPHPAPVTYESLKPTRHRLM	436

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco01g1853	436	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	14	420	-	-
	Acco01g1853	436	Pfam	Leucine rich repeat N-terminal domain	68	103	IPR013210	-
	Acco01g1853	436	MobiDBLite	consensus disorder prediction	412	436	-	-
	Acco01g1853	436	Gene3D	Ribonuclease Inhibitor	67	266	IPR032675	-
	Acco01g1853	436	Gene3D	Ribonuclease Inhibitor	267	419	IPR032675	-
	Acco01g1853	436	SUPERFAMILY	L domain-like	68	373	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco01g1853	Acco-ChrAcco01	34098577	34099887	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco01g1853	64	388	Leucine-rich Repeat extension Gene Families	AT4G13340	43.865	8.66e-79	257