Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1848 ATGTCATCATTTTCAGTGGGGACTTACTTGTTCCCATCCCAACATCTTAAGAATCTCACAGTTCACCCGTCAGCTCATGGCATTCGTACTGTCGATTATTCACTATCAAGTCGGCTCCTTTTTGGCCCCTCTTGTTGTAGGACCAGACTTCCTAGGTTGTTGGGTGATAATGTATTGGCACGTGCTGAAAACAAGGCCAGAGGTCCTACTTCGTCCTCTCAGCCGCTTCAAGCGCCTCAAATTTCCGACTCACAATCTGAGGGCCTGACGCTAGAACCCAGTACTCATGATCCCTTGTGCTCACTTGACAAAACTAGCTCACAAGATTTTGAAGGCACAAACCAGTCCAAGACTGACTTGCTTAAAGCTCTTGCAATATCTGCAGCAGCTGCAACTGGAGTGGTGGCAATTAACCAATCTTGGGTAGCTGATAATCAGGATCTTGCTATGGTATTGCTGTTTGGAATAGGGTATGCAGGCATCATATTTGAAGAATCTCTAGCCTTTAATAAAAGTGGAGTAGGACTGTTGATGGCTGTAAGTCTATGGGTGATGCGGAGTATTGGGGCTCCTTCAACCGATATAGCTGTTTCAGAGTTGACACATGCATCTGCAGAAGTCAGCGAAATAGTGTTTTTCTTGCTTGGCGCCATGACCATCGTTGAGATAGTTGATGCTCATCAAGGATTTAAACTGGTTACTGACAATATAACAACTCGAAAGCCACGCCTTCTTCTGTGGGTGATTGGGTTTGTGACATTTTTCCTCAGTTCAGTCCTAGACAACCTGACATCTACTATAGTCATGGTTTCTCTGTTGCGGAAACTAGTGCCTCCATCAGAGTATCGAAAGATTCTTGGAGGTGTTGTCGTCATAGCTGCAAATGCTGGTGGTGCTTGGACTCCTATTGGTGATGTTACTACTACCATGCTGTGGATACATGGTCACATATCTACATTGCCAACAATGAAGGGTTTGTTTGTACCTTCAGCCATTTCTCTAGCTCTCCCTCTGGCTCTTTTGTCATTGACTAGTGAAGTTAATGGGAAGGGATGTGATTCTCCCAACGTCTTGACATCTGAACAGATGGCTCCTCGAGGACGGCTTGTTCTCTCTGTGGGTATAGGAGCTTTGGTGTTTGTGCCAATTTTCAAGGCCTTAACAGGTTTACCTCCTTACATGGGGATGTTGCTTGGACTTGGTGTGCTTTGGATTCTTACTGATGCTATTCATTATGGGGAATCTGAAAGGCAGATGCTAAAAGTACCACAAGCCTTATCAAGAATAGATGCTCAAGGAGCGCTGTTTTTTCTCGGAATTTTATTATCTGTTAGCAGCCTGGAGGCAGCAGGGATTCTTCGAGAGATAGCAAATGACCTTGACGCTCATGTTCCAAATGTTGAGTTGATTGCAAGCGCGATTGGTATCATATCAGCAGTAATAGACAATGTTCCATTAGTTGCAGCTACAATGGGAATGTATGATCTCTCCTCCTTTCCTAAGGACTCAGAGTTTTGGCAGATGGTCGCCTTTTGTGCTGGTACTGGCGGATCCATGCTTGTCATTGGCTCAGCTGCTGGAGTTGCATTCATGGGGATGGAAAAGGTGGACTTCTTTTGGTACTTACGGAAGATTAGTGTCTTTGCTTTTGCGGGCTATGCAGCTGGTATTGCTGCTTATTTAGCAGCTAATAACCTCCACATTTCTCTACCCACAACTCTTGCTGATTATCCGTTCTTTTTGGGTTCATAA 1752 0.4475 MSSFSVGTYLFPSQHLKNLTVHPSAHGIRTVDYSLSSRLLFGPSCCRTRLPRLLGDNVLARAENKARGPTSSSQPLQAPQISDSQSEGLTLEPSTHDPLCSLDKTSSQDFEGTNQSKTDLLKALAISAAAATGVVAINQSWVADNQDLAMVLLFGIGYAGIIFEESLAFNKSGVGLLMAVSLWVMRSIGAPSTDIAVSELTHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRLLLWVIGFVTFFLSSVLDNLTSTIVMVSLLRKLVPPSEYRKILGGVVVIAANAGGAWTPIGDVTTTMLWIHGHISTLPTMKGLFVPSAISLALPLALLSLTSEVNGKGCDSPNVLTSEQMAPRGRLVLSVGIGALVFVPIFKALTGLPPYMGMLLGLGVLWILTDAIHYGESERQMLKVPQALSRIDAQGALFFLGILLSVSSLEAAGILREIANDLDAHVPNVELIASAIGIISAVIDNVPLVAATMGMYDLSSFPKDSEFWQMVAFCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYLRKISVFAFAGYAAGIAAYLAANNLHISLPTTLADYPFFLGS 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1848 583 MobiDBLite consensus disorder prediction 66 92 - -
Acco01g1848 583 MobiDBLite consensus disorder prediction 64 111 - -
Acco01g1848 583 NCBIfam sodium:proton antiporter NhaD 175 405 - -
Acco01g1848 583 Pfam Citrate transporter 159 513 IPR004680 GO:0016020|GO:0055085
Acco01g1848 583 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 57 582 IPR045016 GO:0006814|GO:0015297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1848 Acco-ChrAcco01 33995250 34001230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1848 1 583 Antiporters AT3G19490 74.658 0.0 796