Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1846 ATGAATCTATACTCTAAGAAACTCCATCGCTTCTGGTGTAAAGTTTCGTTCTTTCTTCTTCTTCCTCTTCTTCTTCCTCCTTCCTCTGCTCTTAACACTGATGGGGTTTCTTTGCTTTCTTTCAAATACTCCATCCTCAGCGATCCATTATCAGTTTTAGAGAGCTGGAACTACTACGACGAAAACCCATGTTCGTGGAATGGAGTTACCTGCGACGAAATCGAAAGCTCAGGTACTATGTTGAGAGTGACTTCCTTGGTTCTTCCTAAGAGCCAGCTTCTGGGTTCGATTTCAGAACAACTAGGAAACATCCCATACCTTCAACGTCTAGATTTGTCCACAAATTTCCTCAATGGATCTTTACCCAGTTCTATTTTCAACTCTTCAGAGCTTCGCGTTCTATCGCTGGCCAACAATGTCATCTCCGGTGAGCTGCCTGAGTTGGTCGGCCAACTGAAAAATCTTCAAGTTCTTAACCTCTCCGACAATGCTTTTGGTGGGTCAGTCCCAGAAAATCTCACCGGTTTGAAAAATCTGACCTTTGTTTCTTTGAGAAGCAACTACTTTTCTGGTCAAGTTCCTAGTGGGTTCAACTCTGTCCAAGTTCTAGATCTGTCTTCGAATCTTCTTAATGGTTCTTTACCAAATACCTTTGGTGGGGAACGATTGAGATACTTGAATCTATCTTATAATAAGATTTCAGGAATCATTCCTCCTAAATTTGCCACACTGATTCCAGAAAACTCTACCATTGATCTTGCATTCAACAATCTGACCGGAGCAATACCAGAATCTCCGGTCCTTCTGAATCAGAAAACAGAGTATTTTGCCGGAAATGGTGATGATCTTTGTGGGAAGCCTCTGGAAAACCTATGTTCCATTCCTTCTACTCTCTCTATTCCTCCATTGAACACAACAACCACAACCACATCTTCAACACCTGCGATTGCAGTCATACCAAAAACAATCGACACAAACCCAGAAACAAACACAACAACAAACGGCTCATCGAATGGCCTAAAACCGACCACAATTGTAGCCATTGTTCTCGGAGACTTCGCCGGTATAGCGATCTTAGCCATGGCCATTTTCTTCTTTGTCTACCATCAAAGAATCACAAGAGGTGAAGCCAAAGCAAAAGAAGACTCGTGTGTGAGAGTGAAACCTCTTATTAGGCTTCACTTTTCCTGCTTGAAAACCAAGGAAGACTCAACTTCATCGGAAACAACCGGGTCTGACAGCGACCATGAGAGCACTAAAATGGAAACAACAACCTCGAATCTTCCGAAAGAAGTGGCTCTTGTGACCCTAGACGCAGAGACAGAGCTGGATTCGGAGACTCTGCTCAAGGCTTCAGCTTGTATGTTGGGAACAACGAGGCGGGGGAGTATAGTGTACAGAGCAGTGCTTGAAGATGGAAGGGCTTTTGCAGTAAGAAGAATCGGAGAATGTGGGTTTGAGAAAAAGAAGGATTTTGAGAATCATATGAAAATAATCGCTAAGATTCGCCATCCCAATTTGGTTAAAGTTCGTGGGTTTTGCTGGGGAGAGGATGAGAAGCTCGTGATCTGTGATTATATTCCCAATGGAAGTCTTGCTAGTAGCTTCAGTCACAGAAGAGCAGGGTGTTCTTCACCACTGAACTGGCCATTGGAGGTGAGGTTGAAGATAGCAAAAGGAATTGCAAGAGGCTTAGCTTTTATTCACGAAAAGAAACATGTTCATGGCAACATCAAACCCAGCAACATCTTATTAAGCTCAGAAATGGAACCGGTAATAAGCGATTTTGGGCTCGACCGTCTGAGGCCTGCCGGTTCAATGGTGAATCGGGGAAGCCAACCCGATCTCCTCCCTCATATGGGTTCATCAAGTGGGACCCACCAAATGTTGCCCTACCAAGCACCAGAGTCTCTTCTTCAGAGTGTTCAAGTCCAACAACCCAAGGCCAAGTGGGATGTGTACTCGTTTGGGATAGTGTTGTTGGAGCTTCTGAGTGGGCGGGTTTTCTCGGACCGGGAGTTAGATTGGTGGCTCAAAGAGGGCGGTTCAGTGGAAGAGAGAAAAAACCGGGTCTTGAGTATGGTTGATGTGGGCATCAAGGGAGAGGTGGCAAGGAAGGAAGAAACCACATTGGTGTGCTTCAAGTTAGGGTTTCGTTGTGCCTCTCTTCAGCCTCAAAAGAGACCGTCCATGAAAGAGGCTTTACAAATCCTAGAGAAAATCCCTTATTAA 2232 0.4462 MNLYSKKLHRFWCKVSFFLLLPLLLPPSSALNTDGVSLLSFKYSILSDPLSVLESWNYYDENPCSWNGVTCDEIESSGTMLRVTSLVLPKSQLLGSISEQLGNIPYLQRLDLSTNFLNGSLPSSIFNSSELRVLSLANNVISGELPELVGQLKNLQVLNLSDNAFGGSVPENLTGLKNLTFVSLRSNYFSGQVPSGFNSVQVLDLSSNLLNGSLPNTFGGERLRYLNLSYNKISGIIPPKFATLIPENSTIDLAFNNLTGAIPESPVLLNQKTEYFAGNGDDLCGKPLENLCSIPSTLSIPPLNTTTTTTSSTPAIAVIPKTIDTNPETNTTTNGSSNGLKPTTIVAIVLGDFAGIAILAMAIFFFVYHQRITRGEAKAKEDSCVRVKPLIRLHFSCLKTKEDSTSSETTGSDSDHESTKMETTTSNLPKEVALVTLDAETELDSETLLKASACMLGTTRRGSIVYRAVLEDGRAFAVRRIGECGFEKKKDFENHMKIIAKIRHPNLVKVRGFCWGEDEKLVICDYIPNGSLASSFSHRRAGCSSPLNWPLEVRLKIAKGIARGLAFIHEKKHVHGNIKPSNILLSSEMEPVISDFGLDRLRPAGSMVNRGSQPDLLPHMGSSSGTHQMLPYQAPESLLQSVQVQQPKAKWDVYSFGIVLLELLSGRVFSDRELDWWLKEGGSVEERKNRVLSMVDVGIKGEVARKEETTLVCFKLGFRCASLQPQKRPSMKEALQILEKIPY 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1846 743 Gene3D Ribonuclease Inhibitor 31 198 IPR032675 -
Acco01g1846 743 Pfam Leucine rich repeat 195 233 IPR001611 GO:0005515
Acco01g1846 743 Gene3D Transferase(Phosphotransferase) domain 1 527 743 - -
Acco01g1846 743 Pfam Protein kinase domain 463 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1846 743 Pfam Leucine Rich repeats (2 copies) 130 163 IPR025875 -
Acco01g1846 743 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 198 742 IPR046959 -
Acco01g1846 743 SUPERFAMILY L domain-like 34 279 - -
Acco01g1846 743 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 31 199 - -
Acco01g1846 743 SUPERFAMILY Protein kinase-like (PK-like) 463 739 IPR011009 -
Acco01g1846 743 Gene3D Ribonuclease Inhibitor 199 294 IPR032675 -
Acco01g1846 743 ProSiteProfiles Leucine-rich repeat profile. 222 243 IPR001611 GO:0005515
Acco01g1846 743 ProSiteProfiles Protein kinase domain profile. 450 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1846 743 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Acco01g1846 743 MobiDBLite consensus disorder prediction 403 425 - -
Acco01g1846 743 MobiDBLite consensus disorder prediction 403 420 - -
Acco01g1846 743 FunFam Leucine-rich repeat receptor-like protein kinase 200 294 - -
Acco01g1846 743 Gene3D Phosphorylase Kinase; domain 1 408 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1846 Acco-ChrAcco01 33974002 33976379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1846 15 741 Receptor kinase-like Gene Family AT4G37250 47.526 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco01g1846 Pkinase 3.2e-29 CL0016