Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1844 ATGGAGAAAGTATTGGAAGAAATGGAAAGGCAAAGCTATATTTCCAAAGGTTGGAATGTATATGCAATGGTGGCCAACTTCTTCATAAAATCCGGTAATAATGCGCTTGCTTATAATCATCTGATCACACACTATACAAGTCTTGGGAACAAAAGAGCAGTGTTGAGACTATGGGATCTGCTGAAAGCTAGATGTAAGAAGCAAATTAGCAGGTTTTGTTTACGGTTGATTGACGACGAATATAGGACAATGGAGGCGTTGCAGGTAGATTTGGATCGGGTTAAGGGACCATGGAGCCCTGAGGAGGACGAGTTGTTGAGGCAGCACGTGGAACGGTATGGTGCTCGGAATTGGTCGGCGATATGCAAGGCGATCCCTGGACGATCTGGTAAATCATGCCGACTACGTTGGTGCAACCAGCTCTCACCGGATGTAGAGCGTGGTGCCTTCACTCCCGAGGAGGACGAGATCATCGTCAAGGCTCACGCCAAGTTCGGCAATAAATGGGCCACTATAGCCAAGCTCCTTAACGGCCGTACGGACAACTCCGTCAAAAACCACTGGAACTCGACGTTGAAGCGCAAGTACTCGTCATTGACCGGCGACGTCGAAGATCCATCGCTCCAACCAGCGAAGAAGCTGGCAGCCGAAGATCGATCGCTGACGATTGTGCCGGTATTAGCTGGTCATTCTTACAGCCGGAGCAGCCAAACTGGATCTGATGTCAGCGATTCCGGTCATCAGGTGGCCTCAAATCCTCCGACTCTGATTCGGCCTGAATCGAGACCACGGGATGCGATCCTGAAGAACGATCTCTCCACAGAACTCACGCTGTCTGTTCCTGGAGCCGATTCGAAGGAGTTATGGATGGTTAAATATTCAGGCCCTAAAGCAGAACATGAGAAGGCATCAACAGAATTGATATTACCATCAACGAAGAAGAAGCACAGTGGAATCACGACATTTGGGCCAGAGTTACTGGCAGTGATGAAGGAGATGATAAGGGAAGAAGTGAGAAATTACATGGCGGCATTGTGA 1038 0.4884 MEKVLEEMERQSYISKGWNVYAMVANFFIKSGNNALAYNHLITHYTSLGNKRAVLRLWDLLKARCKKQISRFCLRLIDDEYRTMEALQVDLDRVKGPWSPEEDELLRQHVERYGARNWSAICKAIPGRSGKSCRLRWCNQLSPDVERGAFTPEEDEIIVKAHAKFGNKWATIAKLLNGRTDNSVKNHWNSTLKRKYSSLTGDVEDPSLQPAKKLAAEDRSLTIVPVLAGHSYSRSSQTGSDVSDSGHQVASNPPTLIRPESRPRDAILKNDLSTELTLSVPGADSKELWMVKYSGPKAEHEKASTELILPSTKKKHSGITTFGPELLAVMKEMIREEVRNYMAAL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1844 345 ProSiteProfiles Myb-like domain profile. 90 141 IPR001005 -
Acco01g1844 345 MobiDBLite consensus disorder prediction 232 264 - -
Acco01g1844 345 MobiDBLite consensus disorder prediction 232 255 - -
Acco01g1844 345 CDD SANT 97 139 IPR001005 -
Acco01g1844 345 ProSiteProfiles Myb-like domain profile. 142 192 IPR001005 -
Acco01g1844 345 Gene3D - 94 146 - -
Acco01g1844 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 142 196 IPR017930 -
Acco01g1844 345 SUPERFAMILY Homeodomain-like 92 188 IPR009057 -
Acco01g1844 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 141 IPR017930 -
Acco01g1844 345 PANTHER MYB PROTEIN-RELATED 95 245 - -
Acco01g1844 345 FunFam MYB transcription factor 95 146 - -
Acco01g1844 345 Gene3D - 148 218 - -
Acco01g1844 345 Pfam Myb-like DNA-binding domain 98 156 - -
Acco01g1844 345 CDD SANT 149 192 IPR001005 -
Acco01g1844 345 SMART sant 94 143 IPR001005 -
Acco01g1844 345 SMART sant 146 194 IPR001005 -
Acco01g1844 345 FunFam Transcription factor MYB44 149 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1844 Acco-ChrAcco01 33944706 33948235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1844 92 345 MYB Transcription Factor Family AT5G67300 46.043 3.72e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco01g1844 Myb_DNA-bind_6 1.6e-17 CL0123