Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1821 ATGATATTCATCGAGGAAAATGGTGATGGTGATGTGAGAGGCAACAAAGAAATACAAGAACTAGAAAGTGAAGTAATGAACAAAAATATTGAAGCAAGTGAACATGAAAATCCAGAAGAACCAGAAGAGTGGTTGAACCTGAGTTTAGGAGGAGGAACACTGGTATCAACAACAACAACATCAGAATTATCAGAATCACGATCGAGATCATCACCAACAAATGCCAAGATCTTCTCATGTAACTTCTGCATGAAGAAGTTCTTTAGTTCGCAGGCCTTAGGGGGACACCAGAACGCGCACAAAAGGGAAAGAGGAGCTGCAAGGAGATATTATCAGACTCAGACGATGACGACGGCGATGATGATGGGTTTGTCCTTTCGGTCACTTGGAGTTCAGCCTCATTCATTGGTGCACAAGCCTGGTTACAGAGGAGGAGGAAAAAGAATAGTACCACCAAGCTTTCATGGGGGAGGGGTTGGAATAATGGGATTCAAGGACTGCTTCAGGCCTCATGATGATGATGATGAAGATGATCATGTGGATTTGGTTTGGCCTGGAAGCTTCCGATTGGTTCACCAACAAGCTGAGATGCCTAAAGAATCAATCAAGCTGGATCTAGAACTTCGACTCTGA 633 0.436 MIFIEENGDGDVRGNKEIQELESEVMNKNIEASEHENPEEPEEWLNLSLGGGTLVSTTTTSELSESRSRSSPTNAKIFSCNFCMKKFFSSQALGGHQNAHKRERGAARRYYQTQTMTTAMMMGLSFRSLGVQPHSLVHKPGYRGGGKRIVPPSFHGGGVGIMGFKDCFRPHDDDDEDDHVDLVWPGSFRLVHQQAEMPKESIKLDLELRL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1821 210 ProSiteProfiles Zinc finger C2H2 type domain profile. 78 105 IPR013087 -
Acco01g1821 210 SUPERFAMILY beta-beta-alpha zinc fingers 73 104 IPR036236 -
Acco01g1821 210 ProSitePatterns Zinc finger C2H2 type domain signature. 80 100 IPR013087 -
Acco01g1821 210 PANTHER ZINC FINGER PROTEIN 4-LIKE 19 210 - -
Acco01g1821 210 Gene3D Classic Zinc Finger 56 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1821 Acco-ChrAcco01 33463249 33463881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1821 65 198 C2H2 Transcription Factor Family AT1G24625 39.726 2.40e-20 83.2