Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1801 ATGATGGTCCGTTCCTTTTATGGAGTTATGGAACGCTGTTTTGGCAGCCTTGAGGATGAAACCGACGGTCTTCTCTGGCACTCGGACTTGAAGCCATACGCCTCCGGTGATTTCTCCATCGCCGTCGTTCAAGCCAATTCCAGCCTCGAAGATCAGAGTCAAGTCTTCACGTCTCCCTCCGCAACCTACATCGGTGTTTACGATGGCCACGGCGGTCCTGAAGCTTCTAGATTTGTTAATAAACGCCTCTTTCCTTATTTACAAAAATTTTCCGCTGAAAATGGGGGATTATCAGTGCATGTGATAAAAAAGGCATTTCAGGCAATCGAGGAAGATTTCTTAAGCTTTGTAAAGCAATCATTGCCCACAATTCCCCGAATTGCTTCGGTAGGATCGTGTTGTCTTCTTGGTGCAATTTCTGATAATATATTATATGCTGCAAACCTTGGTGATTCTAGAGTAGTTCTTGGCCGGAGAGTTTTGGGGGGCCACAAGGTGGTGGCACAACGGTTGTCAACTGACCATAATGTATCTGTTGAGGAGGTGAGGAGAGAGGTCAAATCTCTTCATCCTGATGATGAACAGATTGTGGTTTTTAGTCGTGGAACTTGGAGGATTAAAGGCATTATACAGGTGTCAAGATCTATAGGTGATGTGTATCTTAAGAACCCTGATTGTTGCAAAGACCCACATTTTCAGAAATTCTGTAACCCTATTCCTTTGAAACGTCCTGTAATGACGGCTAAACCATCAGTCATTATCAGGGAGCTTGGATCACAAGACTTGTTTCTGATATTTGCATCAGATGGCCTCTGGGAACATTTAACTGATGAAGAAGCAGTTGAGATTGTGTACAAATATCCAAGAGCAGGAATTGCGAAGAGATTGGTAAGAGCTGCTCTTGATGCAGCAGCGAAGAAGAAAGAGTTGAGATATAATGACATGAAGAAAATTAACAGGGGAGTAAGAAGACTTTTCCATGATGACATTACTGTTATAGTGGTGTATCTTCATCACCGAAAGCGGTCTGCCTTCAAAGTTAAGAAAAGTGCTGTCTGTTCTATAAGTGCTCCTATGGATATTTTCTCCCCAAGTACAGATGAAATAGAACAGAGTATCTCTTGA 1125 0.4276 MMVRSFYGVMERCFGSLEDETDGLLWHSDLKPYASGDFSIAVVQANSSLEDQSQVFTSPSATYIGVYDGHGGPEASRFVNKRLFPYLQKFSAENGGLSVHVIKKAFQAIEEDFLSFVKQSLPTIPRIASVGSCCLLGAISDNILYAANLGDSRVVLGRRVLGGHKVVAQRLSTDHNVSVEEVRREVKSLHPDDEQIVVFSRGTWRIKGIIQVSRSIGDVYLKNPDCCKDPHFQKFCNPIPLKRPVMTAKPSVIIRELGSQDLFLIFASDGLWEHLTDEEAVEIVYKYPRAGIAKRLVRAALDAAAKKKELRYNDMKKINRGVRRLFHDDITVIVVYLHHRKRSAFKVKKSAVCSISAPMDIFSPSTDEIEQSIS 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1801 374 ProSiteProfiles PPM-type phosphatase domain profile. 37 337 IPR001932 -
Acco01g1801 374 CDD PP2Cc 44 337 IPR001932 -
Acco01g1801 374 SUPERFAMILY PP2C-like 44 339 IPR036457 -
Acco01g1801 374 Gene3D - 28 347 IPR036457 -
Acco01g1801 374 PANTHER PROTEIN PHOSPHATASE 36 336 IPR015655 GO:0004722|GO:0006470
Acco01g1801 374 Pfam Protein phosphatase 2C 59 306 IPR001932 -
Acco01g1801 374 FunFam Probable protein phosphatase 2C 42 28 344 - -
Acco01g1801 374 ProSitePatterns PPM-type phosphatase domain signature. 63 71 IPR000222 GO:0043169
Acco01g1801 374 SMART PP2C_4 31 335 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1801 Acco-ChrAcco01 33104946 33107380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1801 22 346 PP2C-type Phosphatase Gene Family AT3G51370 54.655 1.84e-133 385