Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1800 ATGACGAGTGCTTCGGAGCTATTCTACAATCGGAGGTATCGTTTGGGACGAACCTCTGATTTTCTCGGGAACGATTCGTTGCCCGATAGATACCTTCACCTCGACATCAATAACCGTCGCCATCATCACCATCTACATGATTTCAGTGATGGTGAAACTTTACGACGGTTCCCGCCAACGCGGCGGTTATTTCATCGTTTGTCCTCCACGGAGCGAGAATCAGCCAGACTTGATATAAGGCATAACCGGCCTCATTCAAACACAGCCAATTCTGCTGAAAATGTTGGCAGTTTTAGGGGCCCTAGAGTGACTGGTAATGACAGGCTACCCATAGCTGTGGTACATGCAAGGGCAAGACTCCTTCAGAGGTTGAGTGCAGCACCTCCCTCCGGAAACAGGCAAAGGGGTAGAGCCTCTCTAGATATTGATGACATCAGGCATACTAACTTCAGAGATGACGAGAGTAGTGAATCATCAGTTACTGGTTCCGCTGAGGGTTTATTAACTAACTTAACTTTACAAATGGAAAGGACCCTACTCTTACATGAAGGGAACAAAAAACCACCTGGACTCAACCAGGAAGCCATGGACCGTTTGCATGTGGAAGTCTTTGGCGTCAAGGAAACACATACGGAAGAATTGGAATCTAGGGTGCTGCAGGATTGTGGCATATGCCTAGAAACTTTTCTGGAGGGAGATAAGCTCATACGCTTGCCATGTGGACACAGATTCCACTCTGTCTGTTTGGATCCATGGGTTCGAAAATGTGGGGATTGCCCATTCTGTAGAAGAGGTATATTTGTGAATTAG 810 0.4691 MTSASELFYNRRYRLGRTSDFLGNDSLPDRYLHLDINNRRHHHHLHDFSDGETLRRFPPTRRLFHRLSSTERESARLDIRHNRPHSNTANSAENVGSFRGPRVTGNDRLPIAVVHARARLLQRLSAAPPSGNRQRGRASLDIDDIRHTNFRDDESSESSVTGSAEGLLTNLTLQMERTLLLHEGNKKPPGLNQEAMDRLHVEVFGVKETHTEELESRVLQDCGICLETFLEGDKLIRLPCGHRFHSVCLDPWVRKCGDCPFCRRGIFVN 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1800 269 MobiDBLite consensus disorder prediction 81 102 - -
Acco01g1800 269 CDD RING-H2_PA-TM-RING 221 263 - -
Acco01g1800 269 ProSiteProfiles Zinc finger RING-type profile. 222 263 IPR001841 -
Acco01g1800 269 SMART ring_2 222 262 IPR001841 -
Acco01g1800 269 PANTHER SI:CH211-59O9.10 62 267 - -
Acco01g1800 269 Pfam Ring finger domain 221 263 IPR001841 -
Acco01g1800 269 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 179 267 IPR013083 -
Acco01g1800 269 SUPERFAMILY RING/U-box 221 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1800 Acco-ChrAcco01 33100829 33103112 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1800 1 266 C3H Transcription Factor Family AT1G49850 37.546 5.31e-37 129