Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1796 ATGATCGTGGAAGAGAAAAAGCCACAGATAGCGATGGCCGAAGAAGGGTATATGCAACATCTCAGATCTAAAGCAACAGAGCTTCTCCTGAGAGAAGAATGGAAGGAATCCATTGAAGCCTATTCAAACTTCATCACTCTTTGCCAAAACCAAATCGTCCATTCCCAAAATTATGCAGACTCAGATCAGCTTCGAAGGCTCCAAAAATCCCTCTGCATAGCCCTTTCAAACAGAGCCGAAGCAAGATCGAGATTGAAAGAGTTTCACTCTGCGTTGGAAGATTGTGATTTGGCTTTGGTAATCGACGAGACCCATTTCAAGACTCTGATCTGCAAAGGTAAGATATTGCTCAATCTCAATATGTATTACGCGGCTTTGGAATGCTTCAGAGTCGCTCTTCGTGATCCCCAGGCTAATGGAAACTCTGAAAACCTATATGGGTATGTCGAGAAATGTAAAAAACTCGACTTTCTCTCCAAAACTGGATCTCTGGACCTTTCCGATTGGGTTTCAAATGGGTTTCGAGGGAAGTCTCCAGAACTCGCAGAGTTTATTGGTTCTGTGGAGATCATGAAATCTGAGATCAGTGGACGTGGGTTGTTTGCAACTAAGAACATCGATGCAGGGGGGTTGGTTTTGATCACGAAGGCAATAGCGATGGAAAGGAGTGTATTGGGGGGGAAAGATCTAAGTGAGGAAGCTCAATTAGTGCTGTGGAAGAATTTTATTGATAAAGTTACAGACTTTGTTAGAAAATGTCCCAGAACAAGCAATTTGATCTGCCAATTGTCAAGTGGGGAAGATGAAGATTCACTTGAGGTGCCTGATATAGCTCTCTTTAAACCAGGAACAGAGTTGAAGAACAAGAACAAGAACAATCAACCCAGTGAGGCTGGGGAGATTGATAAGGGTGAGTTACTAGCCATATTGGATGTGAATTCTCTAACTGAAGATTCAGTTTCAGCCAATGTATTAGGGAAGAAGAACAAAGATTATTATGGTGTTGGGCTATGGCTATTACCTTCCTTCATCAACCATTCTTGTTATCCCAATGCAAGGAGATTACATGTAGGTGACTATCTGATAGTCCATGCTTCTAAAGATATCAAAGCAGGTGAAGAAATTACCTTTGCCTATTTGGACCCACTTTCTACATTGCACAAGCGCAAAGAGATGTCAATGTCATGGGGTATCCAATGTAGGTGTAAGAGATGCAAGTTTGAGTCAGAAATCATGTGCAAACAAGAGATGAGAGAGATTGAGATTGGTCTTGAAAGAGGGATGGATGTGGGAAATGCAGTGTACAAATTAGAAGAAGAAATGAAGAGATGGAAAGTGCGAGGGAAAGAGAAAGCCTATTTGAGGGCATCATTTTGGTCTGCATATTCTGAGGTTTATAGGTCTGATAGGTTAATGAAGAGGTGGGGACGGCGCATTCCGGCCATGGAAGCCATCGTCCATAGTGTCATAGAAGTTATAGGAGGAGATGAGAGGCTGCTTAAGATTCAAATGGAGGAGATGAAGAAAAATGGAGGTGGTGGTGGACTTGTGGAGATGGAGAAAGCTTTGAAACTGGCAAGAGAAGTGTATGGGAAGGTGGTGAAGAAGCAGGCCATGAGGACTCTTCTTGAGCTTTGTGTTGCAACAAGTGAATGA 1656 0.4263 MIVEEKKPQIAMAEEGYMQHLRSKATELLLREEWKESIEAYSNFITLCQNQIVHSQNYADSDQLRRLQKSLCIALSNRAEARSRLKEFHSALEDCDLALVIDETHFKTLICKGKILLNLNMYYAALECFRVALRDPQANGNSENLYGYVEKCKKLDFLSKTGSLDLSDWVSNGFRGKSPELAEFIGSVEIMKSEISGRGLFATKNIDAGGLVLITKAIAMERSVLGGKDLSEEAQLVLWKNFIDKVTDFVRKCPRTSNLICQLSSGEDEDSLEVPDIALFKPGTELKNKNKNNQPSEAGEIDKGELLAILDVNSLTEDSVSANVLGKKNKDYYGVGLWLLPSFINHSCYPNARRLHVGDYLIVHASKDIKAGEEITFAYLDPLSTLHKRKEMSMSWGIQCRCKRCKFESEIMCKQEMREIEIGLERGMDVGNAVYKLEEEMKRWKVRGKEKAYLRASFWSAYSEVYRSDRLMKRWGRRIPAMEAIVHSVIEVIGGDERLLKIQMEEMKKNGGGGGLVEMEKALKLAREVYGKVVKKQAMRTLLELCVATSE 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1796 551 SMART set_7 186 386 IPR001214 GO:0005515
Acco01g1796 551 SUPERFAMILY TPR-like 19 147 IPR011990 GO:0005515
Acco01g1796 551 Gene3D SET domain 285 410 IPR046341 -
Acco01g1796 551 ProSiteProfiles SET domain profile. 186 380 IPR001214 GO:0005515
Acco01g1796 551 CDD SET_SMYD 300 405 - -
Acco01g1796 551 SUPERFAMILY SET domain 187 406 IPR046341 -
Acco01g1796 551 Gene3D Tetratricopeptide repeat domain 14 156 IPR011990 GO:0005515
Acco01g1796 551 SMART tpr_5 18 51 IPR019734 GO:0005515
Acco01g1796 551 SMART tpr_5 106 139 IPR019734 GO:0005515
Acco01g1796 551 SMART tpr_5 72 105 IPR019734 GO:0005515
Acco01g1796 551 Pfam SET domain 197 379 IPR001214 GO:0005515
Acco01g1796 551 PANTHER TPR DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G12710) 15 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1796 Acco-ChrAcco01 33065362 33067017 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco01g1796 SET 2.1e-15 No_clan