Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1795 ATGGTGTTCTTGGATTTGCTGGTTACGTTGTTTTGTCCTTTTGATTGGTTGCTCTTAAATGGCATCTCGTTTGCAAAGTTCCAAACAACTTTGAGCCAGAGACGCGTGTATGCTGATGCAATGAGTAAAAGTATGGTTGATGTTTTGCACGAAGGGCATCAAACAGGTAGTGATCTTGTTGTTAATCCTAAAAAGGATGTCCTGTTGTATGAAGGGGACAGAGATTTTGAGCCACACAAGGGCATTGAATTTGATTCTCATGAAGCAGCATATTCATTTTATCAAGAATATGCCAAATCTATGGGATTCACCACTTCAATAAAAAACAGCAGACGTTCAAAGAAAACTAAAGAATTTATTGATGCCAAATTCGCGTGCTCTAGATATGGATTTACTCCTGAGTCAGATAGTGGGAGCAGCCGAAGGCCAAGTGTAAAGAAGACAGATTGCAAAGCCTGCATGCATGTGAAGAGAAGGTCAGATGGAAAGTGGATAATTCATGAATTCATAAAGGAGCATAATCATGAACTTCTACCAGCTTTGGCGTATCATTTTCGGATTCATAGAAATGTGAAGTTAGCTGAAAAGAATAACATTGATATATTGCATGCTGTTAGTGAACGCACCAGAAAGATGTATGTTGAAATGTCTAAGCAGTCCAGTGGCTGTCATAATTTTGGGTCTCTTCCCAGTGACGTAAATTGTCAGTTTGAAAGAGGCCAACATTTGGCTCTGGATGAGGGAGATGCTCGAGTTATTCTTGAGTATTTTAAGCACATTCAAAAGGAGAATCCTAACTTCTTTTATGCTATTGATTTGAATGAAGAACAACGATTGAGAAATTTGTTTTGGGTTGATGCAAAAAGTAGGAGTGATTATGTCATCTTTAATGATGTAGTTTCATTTGATACTTCTTATATCAAAAGCAATGATAAGTTACCATTTGCTCCTTTTGTTGGAGTGAACCATCACTGTCAGCCTATATTGCTTGGATGTGCATTGGTTGCCGATGAGACCAAACCAACATTTGTTTGGTTGATGAAGACATGGCTTAGAGCAATGGGTGGGCAAGCTCCTAAAGTCATAATCACTGATCAAGACAAAGCCTTGAAGGCAGCAGCTGAAGAAGTCTTCCCAAATGCACGCCATTGCTTTTCTCTTTGGCACGTACTTGATAGGATACCTGAAAATCTTTCTATGGTGATAAAAAGGTATAAGAATTTCTTGCCAAAGTTTAACAAGTGCATATTTAAGTCTTGGACAGATGAAGAGTTTGACATGAGGTGGTGGAAAATGGTCACTAGATTTGAACTTCAGGATAACTTATGGTTTCAGTCTTTGTACGAAGACCGGAAAAAGTGGGTGCCTACTTATATGGGGGACACCTTTTTAGCTGGAATGTCTACTGCTCAACGTTCTGAAAGTATGAACTCTTTCTTTGACAAATACATACATAAAAAAATTACGGTTAAAGAGTTTGTGAAACAGTATGCGACAATTCTTCAGAAAAGGCATGAAGAGGAAGCGATTGCAGATTTTGATACATTGCACAAACAGCCAGCACTCAAATCTCCTTCTCCTTGGGAAAAACAAATGTCAACAGTTTATACGCATGCGATCTTCAAGAAATTCCAAGTTGAAGTTCTGGGTGTCGTTGGCTGTCATCCGAGGACAGAAGGTGGAGATGGAACAATTGCAAAATTTGTAGTTCAAGATTGTGAGAAGGGGCAAGAGTTTTTGGTCACTTGGAATGAGATGAACTCAGAGGTTTCTTGCTTCTGTCGATTATTTGAATATAAAGGTTTCCTTTGCAGGCATGCATTGAATGTTCTCCAACTTTGTGGCTGTTCAAGTATCCCATCTCACTACATTTTGAAAAGGTGGACCAAAGATGCAAAAAGTAGGGTATCAATGGTAGATGGAACTGAAAGGATCCAAACTAGGGTGCAGCGTTATAACGATTTGTGTAAAAAAGCTATTGAATTGAGTGAAGAAGGATCCTTATCTGAAGAGAGTTACGATGTTGTTTTCCGTGCACTTGTTGATGCCCTGAAGAATTGTGTACATGTGAATAATTCTAACAACAATAATGCAGAAACCAGCAACAATGCTCTTGCCCCACGTGAAACAGAAGAAAATCAGGTTAGCATTGCTACAAAAACAACTAAAAAGAGGACACCAGCTAAGAGAAGAAAGGCACAAATAGATACAGATATGATGCTCGTCGATGCACAAGATAGCCTGCAGCAAATGGATAACCTTAGCTCGGACGGAATGACCCTTAATGGATATTATGGCGCCCAGCAAAATGTGCAAGGACTGGTACAGTTGAACTTAATGGAGCCTCCTCATGATGGTTACTATGTTAATCAACAGAGTATGCAAGGCCTTGGCCAATTGAATTCTATGTCCTCGAGCCATGACGGGTTTTTCGGGACTCAACAAAGCATTCATGGGCTGGGGCCATTGGAGTTTCGTCCGCCGACCACTTTTGGATATACCCTGCAGGATGATCCTGATCTGAGGTCTGCTCAGTTTCATGCCAGCAGTTCAAGAAACACATAG 2565 0.4004 MVFLDLLVTLFCPFDWLLLNGISFAKFQTTLSQRRVYADAMSKSMVDVLHEGHQTGSDLVVNPKKDVLLYEGDRDFEPHKGIEFDSHEAAYSFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGFTPESDSGSSRRPSVKKTDCKACMHVKRRSDGKWIIHEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRKMYVEMSKQSSGCHNFGSLPSDVNCQFERGQHLALDEGDARVILEYFKHIQKENPNFFYAIDLNEEQRLRNLFWVDAKSRSDYVIFNDVVSFDTSYIKSNDKLPFAPFVGVNHHCQPILLGCALVADETKPTFVWLMKTWLRAMGGQAPKVIITDQDKALKAAAEEVFPNARHCFSLWHVLDRIPENLSMVIKRYKNFLPKFNKCIFKSWTDEEFDMRWWKMVTRFELQDNLWFQSLYEDRKKWVPTYMGDTFLAGMSTAQRSESMNSFFDKYIHKKITVKEFVKQYATILQKRHEEEAIADFDTLHKQPALKSPSPWEKQMSTVYTHAIFKKFQVEVLGVVGCHPRTEGGDGTIAKFVVQDCEKGQEFLVTWNEMNSEVSCFCRLFEYKGFLCRHALNVLQLCGCSSIPSHYILKRWTKDAKSRVSMVDGTERIQTRVQRYNDLCKKAIELSEEGSLSEESYDVVFRALVDALKNCVHVNNSNNNNAETSNNALAPRETEENQVSIATKTTKKRTPAKRRKAQIDTDMMLVDAQDSLQQMDNLSSDGMTLNGYYGAQQNVQGLVQLNLMEPPHDGYYVNQQSMQGLGQLNSMSSSHDGFFGTQQSIHGLGPLEFRPPTTFGYTLQDDPDLRSAQFHASSSRNT 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1795 854 SMART 26again6 590 617 IPR006564 GO:0008270
Acco01g1795 854 Pfam SWIM zinc finger 588 614 IPR007527 GO:0008270
Acco01g1795 854 MobiDBLite consensus disorder prediction 695 732 - -
Acco01g1795 854 Pfam MULE transposase domain 299 391 IPR018289 -
Acco01g1795 854 MobiDBLite consensus disorder prediction 695 722 - -
Acco01g1795 854 Pfam FAR1 DNA-binding domain 92 179 IPR004330 -
Acco01g1795 854 ProSiteProfiles Zinc finger SWIM-type profile. 579 615 IPR007527 GO:0008270
Acco01g1795 854 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 72 688 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1795 Acco-ChrAcco01 33055555 33059069 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Acco01g1795 MULE 3.5e-24 CL0219