Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1726 ATGTTTCCCTGCCTAAAAAGCAGAAATTTACTTATGGTTTTGCTCTCAGTTTGTGTGTTCATCATCCCCCATAACTCCCAGATTACCTACCTTTATAAGACCTGTTTAGATCCACCTAGTAGCAGACATCATGCAAAATTCGACTCCAATCTAAATTTCCTCTTGAATTCTCTGTCTTCCAAATCATCCCTTCACAGCTTTTACAAAGCTTTTTCACGTAATCTTTATGGTCTCTACCTTTGCCGGGGAGATGTTTCCATTCAAACCTGTCAAAACTGTATCAAAGTTGCAACTCAAGAAATCAAAATCAAATGTGCATACCACCACAGTGCTTTCATCTGGTATGATCAGTGCATGCTCAGATACTCTCAAAAGAGTTTCTTTGGAGTGGCACATATTTTGCCAGGAACACTCATGTGGAATCAGAAAAATAAAACTTCAGTCAATCAACCCGATGTCGATGCACTGGCTCTGATTTACCAACTAATAAAAGAAGCCACAAATACATCAATGCTGTTCAGAGCAAACGGTTCAGAGGTGGTGACAAATAGTTCTGAGCATCGATATGGGCTTGTGCAGTGCACAAGAGACTTAAATAGTAGTTCATGCAGCTTCTGTTTATCACAATTGATGGTGGAAGCACAAAAGTTTAGACAACAGAAGGCTGGTTGGCACATATTTGGTCCAAGTTGCAATATACGACATGAAAATTATATCTTCTATCAGCAAAATTGGGGACCTGATAATGCCTCTACACCAGCAATAAACCAGCCAGATGATGAAGGTTCTGCAGAAGAATTCGCATACAAAGTTAGAGCCACTGTAGTTATGCTTGTCCTGGTTGCAATGGTTGCATCATTTTTGGGTTTTGCAAGCTATGTATGTTTTCACAGGAAAAGAAGACTTAGAGGGGGAGAAACAACTGATGAAATTATGTTGCAGAAGTTGGAGATTTTGAAGAAGCACCACACTAAAGAGCAAGGAGCCATGAAAGATGAGTACAACAGTGAAGTTCAAAACTTTAGTTTTAAGACCATTAAGGTTGCTACAAACTATTTCTCAGAAGAAGCCACACTTGGGAAAGGAGGATTTGGACTCGTTTTCAAGGGGAAGTTGAGTAATGGCAAGGAGATAGCAGTTAAAAGGCTTTCATTCAAAACAGGGCAAGGCCTTGAAGAGTTTAAGAATGAAGTAACATTGATAGCAAAACTTCAACACAAGAATCTTGTGAGGCTTTTGGGATTCTGTCTGGAAGAAAATGAAAAGCTTCTAGTCTATGAATACATGCCCAACACTAGCCTTGATACCTTCTTGTTTGATCCAACAAAGCGTCAACGACTAGATTGGTCTAAGAGGAGGAATATTATAAAGGGAATTGCAAGAGGACTTCTGTATCTGCATGAGGACTCAAGGCTAAAAATTATTCACAGAGATCTTAAAGCAAGCAATGTGTTACTAGATGAAGAGATGAATCCAAAGATTTCAGATTTTGGAACTGCTAGAATTTTTTGCCATGATCAAATTCAAGCTAGTACTGAAAGAGTTATTGGCACATACGGATATATGGCACCAGAATATGCCTTAGAGGGATTATTTTCTGTCAAATCAGATGTTTACAGCTTTGGTATCATCATGCTAGAAGTTATCAGTGGAAAAAGAAACACTGGCTTCTACCAACCAGAACGTGGTTTAAGTCTTCTCTCCTACGCATGGCGACTCTGGAATGAAAGCAAAGGACTTGAACTTGTGGAGAGTGACTTGATCAATACTTGTGGTGATAAGGATGAAGCTTTGAGATGGATCCATATTGGGCTTCTATGTGTTCAAGAGAACCCACAAGATAGGCCCACCATGTCATCAGTTGTTCTAATGCTAGCAAGTTCCAGCAATCTTCCTCACCCATTTGCTCCTCCATTTTCAGTCGGCAGATTCTTCGCTGCTATTCAGTCCTCCACAACTGTTTCCATTAAGCAAGTTTCATGTGACAATGACTCAGACCAGCCTCCACCTCCTCACTTTCCTGTAATTATTGATGAGGATCTTCCTGGAACGAACTATTAA 2061 0.3988 MFPCLKSRNLLMVLLSVCVFIIPHNSQITYLYKTCLDPPSSRHHAKFDSNLNFLLNSLSSKSSLHSFYKAFSRNLYGLYLCRGDVSIQTCQNCIKVATQEIKIKCAYHHSAFIWYDQCMLRYSQKSFFGVAHILPGTLMWNQKNKTSVNQPDVDALALIYQLIKEATNTSMLFRANGSEVVTNSSEHRYGLVQCTRDLNSSSCSFCLSQLMVEAQKFRQQKAGWHIFGPSCNIRHENYIFYQQNWGPDNASTPAINQPDDEGSAEEFAYKVRATVVMLVLVAMVASFLGFASYVCFHRKRRLRGGETTDEIMLQKLEILKKHHTKEQGAMKDEYNSEVQNFSFKTIKVATNYFSEEATLGKGGFGLVFKGKLSNGKEIAVKRLSFKTGQGLEEFKNEVTLIAKLQHKNLVRLLGFCLEENEKLLVYEYMPNTSLDTFLFDPTKRQRLDWSKRRNIIKGIARGLLYLHEDSRLKIIHRDLKASNVLLDEEMNPKISDFGTARIFCHDQIQASTERVIGTYGYMAPEYALEGLFSVKSDVYSFGIIMLEVISGKRNTGFYQPERGLSLLSYAWRLWNESKGLELVESDLINTCGDKDEALRWIHIGLLCVQENPQDRPTMSSVVLMLASSSNLPHPFAPPFSVGRFFAAIQSSTTVSIKQVSCDNDSDQPPPPHFPVIIDEDLPGTNY 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1726 686 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Acco01g1726 686 Gene3D - 27 127 IPR038408 -
Acco01g1726 686 Gene3D - 136 240 IPR038408 -
Acco01g1726 686 ProSiteProfiles Gnk2-homologous domain profile. 133 240 IPR002902 -
Acco01g1726 686 SMART serkin_6 353 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1726 686 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 50 658 - -
Acco01g1726 686 ProSiteProfiles Protein kinase domain profile. 353 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1726 686 Gene3D Phosphorylase Kinase; domain 1 327 428 - -
Acco01g1726 686 CDD STKc_IRAK 359 625 - -
Acco01g1726 686 Gene3D Transferase(Phosphotransferase) domain 1 429 632 - -
Acco01g1726 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Acco01g1726 686 SUPERFAMILY Protein kinase-like (PK-like) 334 625 IPR011009 -
Acco01g1726 686 FunFam Uncharacterized protein 429 630 - -
Acco01g1726 686 MobiDBLite consensus disorder prediction 659 686 - -
Acco01g1726 686 FunFam Cysteine-rich receptor-like protein kinase 10 316 428 - -
Acco01g1726 686 Pfam Salt stress response/antifungal 170 238 IPR002902 -
Acco01g1726 686 Pfam Salt stress response/antifungal 42 124 IPR002902 -
Acco01g1726 686 Pfam Protein tyrosine and serine/threonine kinase 356 623 IPR001245 GO:0004672|GO:0006468
Acco01g1726 686 ProSiteProfiles Gnk2-homologous domain profile. 29 127 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1726 Acco-ChrAcco01 31546437 31549842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1726 1 634 Receptor kinase-like Gene Family AT4G05200 41.896 3.35e-166 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g1726 PK_Tyr_Ser-Thr 3.6e-48 CL0016