Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1723 ATGAACTCGTCAGAGGCGACAACATCAATTGAAGGAGGAAGGAACTATGTTGAAGCCTCAATAAATGGAGTCTCCATAACTGAGCTTCATCCTCGCTATGTAGAACTTTATGTGTGTAGCACAAAAGAAGCCAGCAAAACCCTCACAGACCTGAAAGTTTTAACCTCCCGTGAAGTCTACAATCCTCTGCCAAATTCAATGGCCAAATCTTATTTTACATTGCTTCAACTTCTCTGTGTTCTTCTCTCACAATTATATAAAGCAGCCAGCCAACCAGAATTTCGATACAATTACTGCAGCAGCAGCACAACGACAACAAATTACACCTACCTAACCAACCTCAAAACCCTTTTATCAAATCTCACTTCCAACAAACAAATAGATAATGGCTTCTACAAACACTCTTATGGTAATTATCCAAATACAATATATACTGTTGGGTTATGCAGGGGAGATGTTATGCCAGACTTTTGCCGTAGTTGCCTTAAAAATTCGTCAGTCCTACTGCCACGGCTATGTGCGAATCAGAAGCAAGCCTTTGGGATGTACGATGAGTGCATGTTATCTTACTCAAACACCTCAATATCAGGCAATCAGGTGAATCCTATTGTTACGGTTTATATGAGGAACGCAGACTCTGCGACAAGTTGGAATCAGTACAATCATGTCCTTGTGGGTCTGCTGCGAAATCTAAGTAGCAGAGCTGCATATGGTGACTCCAATCTGAAGTTTGCTGCGGGAAATGAAGAAGGACCTGACCTTCAAACCATATATGCTGCTGTTCAGTGCACACCTAATCTGAACGAGTCAGAATGCTACAATTGCATGCTTTGGATCATCTCACAAATTCCAAATTGCTGTGATGGCAGGCGAGGTTGTAGGGTTATTACATCCATATGTAACTTTAGATATGAAAGTGGCCGCTTCTATGCAGTTGCAGCTGATGTACCTTTATCAGCTCCGTCGCCACTAGTGTCTCCTCCTCCGCCTCCTCTGCTTACATCTCCATCAACTCCTCCAATCCCCAACACAACATCCACAAAAGGAAGAAAATCACATACTATCATTGCCTCTGTTGTGCCAACTTCTGCACTGGTGCTGCTGCTTATCTTTGTATGGATCTGTGTAAGAGTGAGAAAGCAAGGAAGGAAATTTCCAAGTGAGACTGATGCTGATGATCCAATTGAACTCACCGAATCAATACAATTTGAATTTGACACCCTCAACGTTGCTACAAATAACTTCTCTGATGCTAACAAACTTGGACAAGGAGGATTTGGACCAGTTTACAAGGGCAAGCTCTCCAACGGAAAAGAGATTGCAGTAAAAAGTGGGTATATGGCACCAGAGTATGCAAGGCTTGGACGATTCTCAGTGAAGTCTGATGCCTTCAGTTTTGGTGTACTAATTCTAGAGATTGTGAGTGGCCAAAAGAATGGTGGTCATAATTTGGAGAATATAGCGCATCTGCCAAGTTTGGCATGGAAAAGCTGGAGGAAAGGGATGGCCTCTAACATTATAGATCCCACTTTAAAAGATGGTTCAAGAAATGAAATAATGAGATGCCTTCACATTGGTTTACTTTGTGTTCAAGAAAAAGCTGCTGACAGACCAACCTTGGCTTCCTTTGTGCTGATGCTCGGCAGCCACTCTCTCTCACTTCAAGCACCCATGAAACCTGCATTTTTTATGAATGATATAAGTTCATCAGGCACACAATCTGGGGATCACAGATCTGTGTCAACAAGCTCCAGTGAGAAAAAAAGTGAATGTGTAGAATCATTATCAGTAAATGAGGCCTCAATAACTGATATATATCCTCGATAA 1827 0.4198 MNSSEATTSIEGGRNYVEASINGVSITELHPRYVELYVCSTKEASKTLTDLKVLTSREVYNPLPNSMAKSYFTLLQLLCVLLSQLYKAASQPEFRYNYCSSSTTTTNYTYLTNLKTLLSNLTSNKQIDNGFYKHSYGNYPNTIYTVGLCRGDVMPDFCRSCLKNSSVLLPRLCANQKQAFGMYDECMLSYSNTSISGNQVNPIVTVYMRNADSATSWNQYNHVLVGLLRNLSSRAAYGDSNLKFAAGNEEGPDLQTIYAAVQCTPNLNESECYNCMLWIISQIPNCCDGRRGCRVITSICNFRYESGRFYAVAADVPLSAPSPLVSPPPPPLLTSPSTPPIPNTTSTKGRKSHTIIASVVPTSALVLLLIFVWICVRVRKQGRKFPSETDADDPIELTESIQFEFDTLNVATNNFSDANKLGQGGFGPVYKGKLSNGKEIAVKSGYMAPEYARLGRFSVKSDAFSFGVLILEIVSGQKNGGHNLENIAHLPSLAWKSWRKGMASNIIDPTLKDGSRNEIMRCLHIGLLCVQEKAADRPTLASFVLMLGSHSLSLQAPMKPAFFMNDISSSGTQSGDHRSVSTSSSEKKSECVESLSVNEASITDIYPR 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1723 608 Gene3D Transferase(Phosphotransferase) domain 1 448 552 - -
Acco01g1723 608 SUPERFAMILY Protein kinase-like (PK-like) 397 443 IPR011009 -
Acco01g1723 608 ProSiteProfiles Gnk2-homologous domain profile. 202 309 IPR002902 -
Acco01g1723 608 MobiDBLite consensus disorder prediction 325 349 - -
Acco01g1723 608 FunFam Cysteine-rich receptor-like protein kinase 10 204 309 - -
Acco01g1723 608 Gene3D Phosphorylase Kinase; domain 1 391 447 - -
Acco01g1723 608 Pfam Protein tyrosine and serine/threonine kinase 444 543 IPR001245 GO:0004672|GO:0006468
Acco01g1723 608 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 445 604 - -
Acco01g1723 608 SUPERFAMILY Protein kinase-like (PK-like) 445 580 IPR011009 -
Acco01g1723 608 Gene3D - 91 194 IPR038408 -
Acco01g1723 608 Gene3D - 202 309 IPR038408 -
Acco01g1723 608 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 92 195 - -
Acco01g1723 608 MobiDBLite consensus disorder prediction 570 592 - -
Acco01g1723 608 Pfam Salt stress response/antifungal 99 192 IPR002902 -
Acco01g1723 608 Pfam Salt stress response/antifungal 215 306 IPR002902 -
Acco01g1723 608 ProSiteProfiles Gnk2-homologous domain profile. 92 195 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1723 Acco-ChrAcco01 31473939 31477567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1723 411 608 Receptor kinase-like Gene Family AT4G05200 34.634 3.91e-32 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g1723 PK_Tyr_Ser-Thr 1.1e-06 CL0016