Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1722 ATGAGTATGGCTTCTTCAATTTGTCTCATCATGGCCAAACTCCTGATAGTGTTAATTAGCCTCATTGGGTTATGTAGAGGCGGTGTCAGACCAAAGGAATGCCGCAATTGCTTCAAGAATGCCTCGATTCTTGTCCCAAAGTCATGTCTGAATCAGAAGGAAGCACTCAGTGAGTTATTACAAGGACTAAGAAACAAAGATGCGAGTGCAGATTCACTTCGAAGGAACTATGTTAAAGCCTCAATAAATGGAGTCTCCATAACTGAGCTTTATCCTCGCTATGTGGAAGTTTATATGCTCTATAATCCTCTGCCAAGTTCAACGGCCAAAGCTTATTTTACATTGCTTCAACTTCTCTGTGTTCTTCTCTCACAATTATATGAAGCCGCCAGCCAACCAGAATTTCGATACTATTGTTGCAGCAGCAGCACCACCACAACAAATAACACCGACCAGACCAACCTCAATACCCTTTTATCAAATCTCACTTCCAACAAGCAAATAGATTATGGCTTCTACAATCACTCTTATGGTAATGATCCAAATACAATATATACTGTTGGGTTATGTAGGGGAGATGTTTTGCCAGACTTTTGCCGAAGTTGCCTCAAAAATTCGTCGGTCTTACTGCCACAGCTATGTCCGAATATGAATGAAGCCTTTGGGATGTACGATGAGTGCATGTTATCTTACTCAAACACCTCAATATTAGGCTATCAGGTGACTCCTATTGTTACTGTTTCTATGAGGAACGTGGGATCTGCGACAAATTGGAATCAGAACAATCAGGTCCTTGTGGGTCTGCTGCAAAATCTGAGTAGCAGAGCTGCATCAGGTGACTCGAATCTGAAGTTTGCTGCGGGAAATGAAGAAGGACCTGACCTTCAAACCATATATGCTGTTGTTCAGTGCACACCTAATCTGAACGAGTCAGAATGCAACAATTGCCTGCTTTGGATCATCTCACAAATTCCAAATTACTGTAATGGCAGGCGAGGTTGTAGGGTTATTAGATCCATATGTTACTTTAGATATGAAAGTGGCCGCTTCTATGCAGTTGCAGCTGATGTACCTATATCAGCTCCGTCGCCACTAGTGTCTCCTCCTCTGCCTACTCTACTTACATCTCCATCAACTCCTCCAACCACCAACACAACATCCACAAAAGGAAGAAAATCACATACTATCATTGCCTCTGTGGTGCCAACTTCTGCACTGGTGCTGCTGCTTATCTTTGTATGGATCTGTGTAAGAGTGAGAAAGCAAGGTAGGAAATTTCCAAGTGAGACTGAAGCTGATGATCCAATTGACCTCACTGAATCAATACAATTCAAATTGGACACCCTCAACGTTGCTACAAATAACTTCTCTGATGCTAACAAACTTGGACAAGGAGGATTTGGACCAGTTTACAAGGGCAAGCTCTCCAACGGAAAAGAGATTGCAGTAAAAAGTGGGTATATGGCACCTGAGTATGCAAGGCTTGGATGGTTCTCGGTGAAGTCTGATGTCTTCAGTTTTGGTGTACTAATTCTAGAGATTGTGAGTGGCCAAAAGAATGGTGGCTTTCATAATTTTGAGAATGTAGAGCATCTACCAAGTTTGGCATGGAAAAGCTGGAGGAAAAGGATGGCCTCTAACATTATAGATCCCACGCTAAAAGATGGTTCAAGAAATGAAATAATGAGATGCCTTCACATTGGTTTACTTTGTGTTCAAGAAAAAGCTGCTGACAGACCAACCTTGGCTTCCTTTGTGCTGATGCTCGGCAGCCACTCTTTCTCATTTCAAGCACCCATGAAACCTGCATTTTTTATGAATGATATAAGTTCATTAGGCCGACAATCTGGGGATCACAGATCTATGTCAACAAGCTCCAATGAGAAAAAAAAGTGA 1896 0.4204 MSMASSICLIMAKLLIVLISLIGLCRGGVRPKECRNCFKNASILVPKSCLNQKEALSELLQGLRNKDASADSLRRNYVKASINGVSITELYPRYVEVYMLYNPLPSSTAKAYFTLLQLLCVLLSQLYEAASQPEFRYYCCSSSTTTTNNTDQTNLNTLLSNLTSNKQIDYGFYNHSYGNDPNTIYTVGLCRGDVLPDFCRSCLKNSSVLLPQLCPNMNEAFGMYDECMLSYSNTSILGYQVTPIVTVSMRNVGSATNWNQNNQVLVGLLQNLSSRAASGDSNLKFAAGNEEGPDLQTIYAVVQCTPNLNESECNNCLLWIISQIPNYCNGRRGCRVIRSICYFRYESGRFYAVAADVPISAPSPLVSPPLPTLLTSPSTPPTTNTTSTKGRKSHTIIASVVPTSALVLLLIFVWICVRVRKQGRKFPSETEADDPIDLTESIQFKLDTLNVATNNFSDANKLGQGGFGPVYKGKLSNGKEIAVKSGYMAPEYARLGWFSVKSDVFSFGVLILEIVSGQKNGGFHNFENVEHLPSLAWKSWRKRMASNIIDPTLKDGSRNEIMRCLHIGLLCVQEKAADRPTLASFVLMLGSHSFSFQAPMKPAFFMNDISSLGRQSGDHRSMSTSSNEKKK 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1722 631 Gene3D - 132 235 IPR038408 -
Acco01g1722 631 Gene3D - 243 350 IPR038408 -
Acco01g1722 631 Gene3D Transferase(Phosphotransferase) domain 1 490 599 - -
Acco01g1722 631 Pfam Salt stress response/antifungal 261 347 IPR002902 -
Acco01g1722 631 Pfam Salt stress response/antifungal 140 233 IPR002902 -
Acco01g1722 631 FunFam Cysteine-rich receptor-like protein kinase 10 245 350 - -
Acco01g1722 631 MobiDBLite consensus disorder prediction 370 390 - -
Acco01g1722 631 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 486 627 - -
Acco01g1722 631 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 133 236 - -
Acco01g1722 631 SUPERFAMILY Protein kinase-like (PK-like) 439 484 IPR011009 -
Acco01g1722 631 Pfam Protein tyrosine and serine/threonine kinase 483 586 IPR001245 GO:0004672|GO:0006468
Acco01g1722 631 ProSiteProfiles Gnk2-homologous domain profile. 133 236 IPR002902 -
Acco01g1722 631 SUPERFAMILY Protein kinase-like (PK-like) 486 589 IPR011009 -
Acco01g1722 631 Gene3D Phosphorylase Kinase; domain 1 426 489 - -
Acco01g1722 631 ProSiteProfiles Gnk2-homologous domain profile. 243 350 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1722 Acco-ChrAcco01 31440051 31447167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1722 452 628 Receptor kinase-like Gene Family AT4G05200 33.880 5.40e-29 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g1722 PK_Tyr_Ser-Thr 2e-07 CL0016