Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1718 ATGACAAGAAATACTGTCACTATTTTTCTGGCTCTGCTTTCTTTCCTTTCCCATCTTCTCATTCTCACCACCCAGCAGGAGCAGCAGCACCCTGACTACGTTTATCCCCATTGTTTCAGTGACAAAGGAACCTACACAAACACAAGTGCCTATCACAATAACCTCAATACCCTTCTTTCCGATTTCACCTCCAACACAACAGATGACTATGGCTTCTACAATTATTCGTACGGCCAAAACCCCGACACAGTTTACGCATCAGGACTCTGCAGAGGAGATATTACACCTGATGTTTGCCGTAGTTGCCTCAATAATGCCGCAAGTCTTCTCCCACATAATTGTTTAAACCAGAAGGAGGCATTTCTATACTATGATTTGTGCATCTTTCAATACTCAAGTAGCTCAATGTTTGGGATATACGAGTATCCTGGTTTTTTCAAAGCGATTAACAACCCAGAAAATTCAGCAGATCCAGACCAGTACACAGATGCGCTTGATCGGCTAATGCAAGTTCTTAAGACCAACGCCGCAGATGGTGGCTCTCATCGGAAGGTGGCTGCGGGAAACTCCTCAACCCTAACATCTGGTCAAACTGTACATGGTCTGGCTCAGTGCACGCCGGATTTAACCGAGCAAGAATGCGATGACTGCTTGGTGAAGGCTATCTCGGACATCCCACTATGTTGTCAGAACAAGGTTGGTGGTAGGGTTATCAAACGGAACTGCAATCTTAGATTTGAGAAGGTCCGGTTCTATGATCCTACAGTTATTGTTCCAATACCAGTTCCTCTTCCTTCTTCTACCGGCAATAGTCCCTCGCAAGGACCTCCCGATGCGCCAAACGTTCCATCTTCCGGAGAAGGGAAAAGCAATAGATCAAGAATAATCATTATCGTAGCTGTGGTGGTTGGAGCCTTCATCGTCCTTCTCATCTTGATTTTAATCTATTTTGCATTTAGGAAATCGAAGAAAACCGTTGATAATGAAGCTGAAAAAAAGGATGAAGAAGAAACTAAACCAGATGATTCTTTACGATTTGATTTTGAAACAATCAGGGTCGCTACAGATAACTTCTCTATTGCAAATAAACTTGGACAAGGAGGATTTGGGCCAGTGTATAAGGGTAAGCTCCGCAATCGACAAGAAGTTGCCGTCAAAAGGTTGTCCACGAATTCTGGACAAGGAGATTTAGAATTCACGAATGAAGTGTTATTGATGGCCGAGCTCCAACATCGCAATTTAGTAAGGTTACTTGGTTTCTGTTTAGAAGGAACAGAAAGGCTTCTCATATATGAATTTCTTCCCAATAGAAGTCTTGATTATGTATTATTTGATCCAATCCAGCGTACTCATTTGAATTGGGAAGTGCGTTACAAAATTATAATGGGTATCGCTCGTGGCATTCTTTACCTTCATGAAGATTCAAGATTGCGTATTATTCATCGTGATCTCAAAGCAAGTAATATTCTTCTAGACAAAGAGCTGAATGCCAAGATAGCAGATTTTGGCATGGCAAGATTATTTGATTTAGATCAAACTCAAACCAATACCAGCAAAATTGTTGGAACCTTTGGATACATGGCACCAGAATATGCATTACATGGACAAATATCAACAAAATTAGATGTCTTTAGCTTTGGTATTTTGGTTCTTGAGATTATAAGTGGCCAGAATAATAGTAACGTGATTGACGAAGAGAATATACAAGATCTTTTAAGCTTTGTATGGAAAAATTGGAGGGAAGGCACAACCTCGAACATAGTAGATCCTGTTATAAGCAGTGGTTCAAGGGATGAAATCACGAGGTGTATTCACATCGCATTAGTGTGTGTTCAAGAAAATGTAGGAGACAGGCCTACCATGGCTTCTGTTGAACTTATGCTAAACAGCTACTCTTCATCTCTCCCTCTACCTTCGAGGCCTCCATGTTTAATGAATTTCAGCAGTACGCTTGAGATGCAGCCCAGAGAGGAAAATGAAGGGGAGCAAGTACGTTACTCTGCTCAAGAAGCATAA 2016 0.4147 MTRNTVTIFLALLSFLSHLLILTTQQEQQHPDYVYPHCFSDKGTYTNTSAYHNNLNTLLSDFTSNTTDDYGFYNYSYGQNPDTVYASGLCRGDITPDVCRSCLNNAASLLPHNCLNQKEAFLYYDLCIFQYSSSSMFGIYEYPGFFKAINNPENSADPDQYTDALDRLMQVLKTNAADGGSHRKVAAGNSSTLTSGQTVHGLAQCTPDLTEQECDDCLVKAISDIPLCCQNKVGGRVIKRNCNLRFEKVRFYDPTVIVPIPVPLPSSTGNSPSQGPPDAPNVPSSGEGKSNRSRIIIIVAVVVGAFIVLLILILIYFAFRKSKKTVDNEAEKKDEEETKPDDSLRFDFETIRVATDNFSIANKLGQGGFGPVYKGKLRNRQEVAVKRLSTNSGQGDLEFTNEVLLMAELQHRNLVRLLGFCLEGTERLLIYEFLPNRSLDYVLFDPIQRTHLNWEVRYKIIMGIARGILYLHEDSRLRIIHRDLKASNILLDKELNAKIADFGMARLFDLDQTQTNTSKIVGTFGYMAPEYALHGQISTKLDVFSFGILVLEIISGQNNSNVIDEENIQDLLSFVWKNWREGTTSNIVDPVISSGSRDEITRCIHIALVCVQENVGDRPTMASVELMLNSYSSSLPLPSRPPCLMNFSSTLEMQPREENEGEQVRYSAQEA 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1718 671 SUPERFAMILY Protein kinase-like (PK-like) 345 652 IPR011009 -
Acco01g1718 671 ProSiteProfiles Gnk2-homologous domain profile. 33 136 IPR002902 -
Acco01g1718 671 ProSiteProfiles Protein kinase domain profile. 358 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1718 671 CDD STKc_IRAK 364 629 - -
Acco01g1718 671 Pfam Protein tyrosine and serine/threonine kinase 360 576 IPR001245 GO:0004672|GO:0006468
Acco01g1718 671 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 31 136 - -
Acco01g1718 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Acco01g1718 671 Gene3D Transferase(Phosphotransferase) domain 1 434 635 - -
Acco01g1718 671 FunFam Cysteine-rich receptor-like protein kinase 28 434 636 - -
Acco01g1718 671 ProSiteProfiles Gnk2-homologous domain profile. 143 251 IPR002902 -
Acco01g1718 671 Gene3D - 32 135 IPR038408 -
Acco01g1718 671 Gene3D - 144 251 IPR038408 -
Acco01g1718 671 Pfam Salt stress response/antifungal 38 133 IPR002902 -
Acco01g1718 671 Pfam Salt stress response/antifungal 153 248 IPR002902 -
Acco01g1718 671 MobiDBLite consensus disorder prediction 263 289 - -
Acco01g1718 671 FunFam Cysteine-rich receptor-like protein kinase 10 320 433 - -
Acco01g1718 671 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 43 653 - -
Acco01g1718 671 SMART serkin_6 358 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco01g1718 671 Gene3D Phosphorylase Kinase; domain 1 318 433 - -
Acco01g1718 671 FunFam Cysteine-rich receptor-like protein kinase 10 146 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1718 Acco-ChrAcco01 31360297 31364530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1718 41 645 Receptor kinase-like Gene Family AT4G21410 49.109 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g1718 PK_Tyr_Ser-Thr 1.3e-46 CL0016