Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco01g1712 ATGCCTATCGTTTTTCTACTTCTGATTTCGTTCCTTTCTCATCTTCCCATTCTCACAGCCCAGACTCCGATCTTCAACTATACCTCTTGTTTCCCAGAGGAAGTTAAGTTTACAAATTCAAGCACCTACCAGTCCAACCTCAACATCGTTCTCTCAGATCTCACTTCCAACACAGAAATCGACTATGGTTTCTACAATATGTCTCTTGGCAAAAATCCTGATAGAGTCAGCGCCATTGGGTTATGTAGAGGAGATATTGAACCAAACGAATGCCGTACTTGCCTTAAGAACGCCTCAATTCTTGCCCAGGATAAGTGCCCAAATCAAATGGATGCCATGGGAGGCTATGATGAATGCTTTGTTCGATACTCGAACAGATCAATACTTGGTGTACTGGACGAACCTGAGTACTGGCTCTATTCTTGGACTGGTGGGGATAAACCAGCAGATCCGGTAAAGTACAACCAAGAGGCAAAGGAGTTATTGGAAGAGCTGAGAGTTAAAGCTGCAGCTAGAGATTCACTCCGTAAATATGCTGCAGCGAACAAATCGGGCACACAATCTCAAACTATATACGGTACAGTTCAGTGCACTCCTGATTTGTCTCAGCGAGATTGCTCAGAGTGCTTGTCGAGGGCGATTGCAAAAATTGCAGATTCGTGTTGTAGCGAAAAGGTGGGGACTAGGATTCTCAAACTCAACTGCAATGTTAGGTTTGAGAACTATCTTTTCTTTGAACCTGTGGCTCAGAATTCACCACCATCACTATTATCTCCTCCTGCAACTTCCACCTTAGAAGATTTCTACGTCTACAGTAACGGATACATGGCTCCAGAGTATGCACTACATGGGCAATGCTCAATGAAGTCGGATGTGTATAGTTTTGGGGTGCTAATTCTAGAGATTTTAAGTGGGAAGAAAAACAATAGCATCTTCAATGAGAATATTCACGGTCTACTAGACTTTGCATGGCAAAACTGGAGGCAAGGGAATGGCTCAAATATAATAGATCCTTTGTTAATCAATAATGGTTCAGGAAATGAAATAATGAGATGCATTCACGTTGGATTGCTATGTGTTCAGGAAAATTTAGGTGATCGGCCAACGATGGCTTCAGTAGCAATAATGCTGAGCAGCCACTCTGTTTCTCTTCAAGTCCCATCGAAGCCTCCAATTTTAATGAGTGACAGCAGTTCATATGAGATGTCGTTGTTGAAAGATTCTAGTTCAAAGGCTACAAGATCAAGTGAAGGAGGAAGAAACTATGTTCAAGCGTCAAGAAATGAGGCCTCCATCTCAGATCTATCTCCTCGCTAA 1317 0.4252 MPIVFLLLISFLSHLPILTAQTPIFNYTSCFPEEVKFTNSSTYQSNLNIVLSDLTSNTEIDYGFYNMSLGKNPDRVSAIGLCRGDIEPNECRTCLKNASILAQDKCPNQMDAMGGYDECFVRYSNRSILGVLDEPEYWLYSWTGGDKPADPVKYNQEAKELLEELRVKAAARDSLRKYAAANKSGTQSQTIYGTVQCTPDLSQRDCSECLSRAIAKIADSCCSEKVGTRILKLNCNVRFENYLFFEPVAQNSPPSLLSPPATSTLEDFYVYSNGYMAPEYALHGQCSMKSDVYSFGVLILEILSGKKNNSIFNENIHGLLDFAWQNWRQGNGSNIIDPLLINNGSGNEIMRCIHVGLLCVQENLGDRPTMASVAIMLSSHSVSLQVPSKPPILMSDSSSYEMSLLKDSSSKATRSSEGGRNYVQASRNEASISDLSPR 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco01g1712 438 MobiDBLite consensus disorder prediction 404 438 - -
Acco01g1712 438 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 23 128 - -
Acco01g1712 438 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 8 255 - -
Acco01g1712 438 SUPERFAMILY Protein kinase-like (PK-like) 267 404 IPR011009 -
Acco01g1712 438 Gene3D - 24 127 IPR038408 -
Acco01g1712 438 Gene3D - 138 244 IPR038408 -
Acco01g1712 438 FunFam Cysteine-rich receptor-like protein kinase 10 139 244 - -
Acco01g1712 438 Pfam Salt stress response/antifungal 151 242 IPR002902 -
Acco01g1712 438 Pfam Salt stress response/antifungal 35 125 IPR002902 -
Acco01g1712 438 ProSiteProfiles Gnk2-homologous domain profile. 25 128 IPR002902 -
Acco01g1712 438 Pfam Protein tyrosine and serine/threonine kinase 275 308 IPR001245 GO:0004672|GO:0006468
Acco01g1712 438 Gene3D Transferase(Phosphotransferase) domain 1 250 388 - -
Acco01g1712 438 ProSiteProfiles Gnk2-homologous domain profile. 135 244 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco01g1712 Acco-ChrAcco01 31221168 31224436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco01g1712 274 393 Receptor kinase-like Gene Family AT4G38830 55.285 7.15e-40 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco01g1712 PK_Tyr_Ser-Thr 7e-07 CL0016